LOCUS BC057762 2447 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens fibronectin type III domain containing 7, mRNA (cDNA
clone IMAGE:5269001), partial cds.
ACCESSION BC057762
VERSION BC057762.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2447)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2447)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734936.
FEATURES Location/Qualifiers
source 1..2447
/db_xref="H-InvDB:HIT000259700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5269001"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene <1..2447
/gene="FNDC7"
/gene_synonym="FLJ35838"
/db_xref="GeneID:163479"
CDS <1..1575
/gene="FNDC7"
/gene_synonym="FLJ35838"
/codon_start=1
/product="FNDC7 protein"
/protein_id="AAH57762.1"
/db_xref="GeneID:163479"
/translation="FFDSGALKASFSWALAEGAFNYTVMALSDSSELTCSTTFSSCTI
SSLQCGTEYLISVLASNDAGSSKSSSAMTLKTVACAPGRVTIQEDPPGHLSVAWSSVD
LGDYYVVFVKSDDGLEVHCNTSLTQCNFLSECGFTYFISVFAYNKAGQSPLGDIFNYT
TAPCCPSDINPVLVSSDRVEIVWSPVRGAELYETKAVDGYNMVECNDTTPACTLSALE
CDTKYNITVYSFNEVRGSNMSCTPQFITTAPCSPEIKNVSRDAFSMINVHWRSTNDDA
TYTVTAQGEKGLYQCSSTGESCTMRGLPCGSVFSVTAVAETQAGRSLPSYSVPLETVP
CCPTGLTVTQITQSVINVSWTIGRVAQTHVAVLESHTGQSKCHTHQNHCLLGCITCGI
NYTVTLKAISATGLTADCSYQSYFSGACCPLGVKLYRLGPNGIRIYWQASRGSANYST
DLYGSKGIFTCTPSAGLSFCDVTEIPCGDVYTVMVSPVAKTGLKLTFCPKKIYSVTCS
GSTLGMVIYRGKRNEE"
BASE COUNT 667 a 575 c 579 g 626 t
ORIGIN
1 tttttcgata gtggagctct gaaggcatct ttttcctggg cactggcaga aggagctttc
61 aattatactg tgatggcttt gagcgactct tcagagctga cctgcagtac aactttcagt
121 tcctgcacca tctcttccct ccagtgtgga actgaatact tgatttcagt tttagcaagt
181 aatgatgctg gatctagcaa atcatcttca gcaatgaccc tgaaaactgt tgcttgtgca
241 cccggaagag tgacgatcca agaagatccc cctggccacc tgtctgtggc ttggtccagt
301 gtagatctgg gtgactacta tgtggtcttt gtgaagagtg atgatggctt ggaagtacac
361 tgcaacacat ctctcactca gtgcaacttc ttatctgagt gtggcttcac ttattttatt
421 agtgtttttg cctataacaa ggcagggcaa agtcctttgg gtgacatatt caattatacc
481 acagctccct gttgtcctag tgacattaac cccgtgttgg tgtccagtga cagagttgag
541 attgtctggt ctcctgtccg tggtgccgaa ctgtatgaaa ccaaggctgt agatgggtac
601 aacatggttg agtgcaatga cactactcct gcgtgcaccc tttcggctct agagtgtgac
661 accaagtaca acatcacagt gtattcattc aatgaagtcc gaggtagcaa tatgtcatgt
721 actccccagt tcataaccac agctccttgc agtcctgaaa taaaaaatgt ttcaagggat
781 gcattctcca tgattaatgt gcactggcga tccactaatg atgatgctac ttacacggtg
841 actgcccaag gggagaaagg actgtatcag tgcagcagca caggagagtc ctgcaccatg
901 cggggcttgc cctgtggctc agtgttctct gtcactgctg tggccgaaac acaggcagga
961 cggagcctgc ccagctacag tgtgcccctg gaaacagtgc catgctgtcc aaccggtctg
1021 acagtaactc aaatcaccca gtcagtaatc aacgtgagct ggactattgg gagagtggct
1081 caaacccatg ttgcagttct ggagtcacac actggacagt ctaagtgtca cactcatcaa
1141 aaccactgcc tcctaggatg catcacatgt ggcatcaatt acacagtgac attaaaagca
1201 attagtgcca ccgggttgac tgcagattgc tcctaccaaa gttatttctc tggtgcctgc
1261 tgccctttgg gggtgaaatt atataggctg ggccctaatg gcatccggat ctactggcaa
1321 gcctccaggg gctctgccaa ttacagcact gacctctatg gctccaaagg cattttcacg
1381 tgcaccccga gtgctggcct cagtttctgt gatgtcactg agataccctg tggggatgta
1441 tacactgtga tggtctcacc agttgctaaa acaggattga agcttacttt ctgtccaaaa
1501 aaaatatatt cagtaacttg ctctggaagt acacttggaa tggtgattta tagagggaag
1561 agaaatgaag aatgacaaag tgagccccag ataaaaacaa aaacttgacc aaagttgtct
1621 catttgttag tgattagaga tggaaaagat ctactagaat gtagaataaa aatgcctcta
1681 ggataggaaa agctcctttg gcctttagaa gaacaactct gactctgctt cctgagggca
1741 aggtcaggtg tgtcctcacc tgcacagcag ttggagatct gctatgtgag gactctggag
1801 agaaatgaat ccagaaagtc ccctggacgg ctgctagcct gagttggcac actgtgagaa
1861 ccctggaaac aagaaagttc tgcttagcag aaattctgag atttcacatc cacacacacc
1921 acagacttca acacatccac ttcatgagtg ttttacaaca gcacttgtct gcagccccct
1981 caggggctgg aaatgttcac tcccagaaag tcaagccacc cacatgcaga cagcacttat
2041 cccaagacaa acctccagca ggacttcagt ataggttgga aagcagtagc tgccagggca
2101 acctgagata acaaacgccc tcatcgcaag ttaggagcaa agctgagctg cttgcagggt
2161 tcgctgagcc aaagcatcag gtggcgtgac atctatggga gcatctggga aagcagagct
2221 gccagcctgt tgctagaagg gttgcagtta tgctttctgc atgagagaag atgtcaaatg
2281 gagagcctca aactgtggcc gactgacatg cgtgcatctt ttgggggagg accatccatc
2341 ttattggcca tatcccccac tcatattgta attacttttt tcatctttgg agggggaagg
2401 caatgaaata taacataaat ctctcatacc taaaaaaaaa aaaaaaa
//