LOCUS BC057397 2533 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens heat shock 70kDa protein 1B, mRNA (cDNA clone
MGC:60385 IMAGE:6188453), complete cds.
ACCESSION BC057397
VERSION BC057397.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787974.
FEATURES Location/Qualifiers
source 1..2533
/db_xref="H-InvDB:HIT000259696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60385 IMAGE:6188453"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2533
/gene="HSPA1B"
/gene_synonym="HSP70-2"
/db_xref="GeneID:3304"
/db_xref="HGNC:HGNC:5233"
/db_xref="MIM:603012"
CDS 193..2118
/gene="HSPA1B"
/gene_synonym="HSP70-2"
/codon_start=1
/product="heat shock 70kDa protein 1B"
/protein_id="AAH57397.1"
/db_xref="GeneID:3304"
/db_xref="HGNC:HGNC:5233"
/db_xref="MIM:603012"
/translation="MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF
TDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPK
VQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKD
AGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFE
VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS
STQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL
VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLL
LLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKG
RLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEAD
KKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGA
QGPKGGSGSGPTIEEVD"
BASE COUNT 584 a 690 c 776 g 483 t
ORIGIN
1 gctgcgaggg tccgtttcgt ctttcgagag tgactcccgc ggtcccaagg ctttccagag
61 cgaacctgtg cggctgcagg caccggcgtg ttgagtttcc ggcgttccga aggactgagc
121 tcttgtcgcg gatcccgtcc gccgtttcca gcccccagtc tcagagcgga gcccacagag
181 cagggcaccg gcatggccaa agccgcggcg atcggcatcg acctgggcac cacctactcc
241 tgcgtggggg tgttccaaca cggcaaggtg gagatcatcg ccaacgacca gggcaaccgc
301 accaccccca gctacgtggc cttcacggac accgagcggc tcatcgggga tgcggccaag
361 aaccaggtgg cgctgaaccc gcagaacacc gtgtttgacg cgaagcggct gatcggccgc
421 aagttcggcg acccggtggt gcagtcggac atgaagcact ggcctttcca ggtgatcaac
481 gacggagaca agcccaaggt gcaggtgagc tacaaggggg agaccaaggc attctacccc
541 gaggagatct cgtccatggt gctgaccaag atgaaggaga tcgccgaggc gtacctgggc
601 tacccggtga ccaacgcggt gatcaccgtg ccggcctact tcaacgactc gcagcgccag
661 gccaccaagg atgcgggtgt gatcgcgggg ctcaacgtgc tgcggatcat caacgagccc
721 acggccgccg ccatcgccta cggcctggac agaacgggca agggggagcg caacgtgctc
781 atctttgacc tgggcggggg caccttcgac gtgtccatcc tgacgatcga cgacggcatc
841 ttcgaggtga aggccacggc cggggacacc cacctgggtg gggaggactt tgacaacagg
901 ctggtgaacc acttcgtgga ggagttcaag agaaaacaca agaaggacat cagccagaac
961 aagcgagccg tgaggcggct gcgcaccgcc tgcgagaggg ccaagaggac cctgtcgtcc
1021 agcacccagg ccagcctgga gatcgactcc ctgtttgagg gcatcgactt ctacacgtcc
1081 atcaccaggg cgaggttcga ggagctgtgc tccgacctgt tccgaagcac cctggagccc
1141 gtggagaagg ctctgcgcga cgccaagctg gacaaggccc agattcacga cctggtcctg
1201 gtcgggggct ccacccgcat ccccaaggtg cagaagctgc tgcaggactt cttcaacggg
1261 cgcgacctga acaagagcat caaccccgac gaggctgtgg cctacggggc ggcggtgcag
1321 gcggccatcc tgatggggga caagtccgag aacgtgcagg acctgctgct gctggacgtg
1381 gctcccctgt cgctggggct ggagacggcc ggaggcgtga tgactgccct gatcaagcgc
1441 aactccacca tccccaccaa gcagacgcag atcttcacca cctactccga caaccaaccc
1501 ggggtgctga tccaggtgta cgagggcgag agggccatga cgaaagacaa caatctgttg
1561 gggcgcttcg agctgagcgg catccctccg gcccccaggg gcgtgcccca gatcgaggtg
1621 accttcgaca tcgatgccaa cggcatcctg aacgtcacgg ccacggacaa gagcaccggc
1681 aaggccaaca agatcaccat caccaacgac aagggccgcc tgagcaagga ggagatagag
1741 cgcatggtgc aggaggcgga gaagtacaaa gcggaggacg aggtgcagcg cgagagggtg
1801 tcagccaaga acgccctgga gtcctacgcc ttcaacatga agagcgccgt ggaggatgag
1861 gggctcaagg gcaagatcag cgaggcggac aagaagaagg ttctggacaa gtgtcaagag
1921 gtcatctcgt ggctggacgc caacaccttg gccgagaagg acgagtttga gcacaagagg
1981 aaggagctgg agcaggtgtg taaccccatc atcagcggac tgtaccaggg tgccggtggt
2041 cccgggcctg ggggcttcgg ggctcagggt cccaagggag ggtctgggtc aggccctacc
2101 attgaggagg tggattaggg gcctttgttc tttagtatgt ttgtctttga ggtggactgt
2161 tgggactcaa ggactttgct gctgttttcc tatgtcattt ctgcttcagc tctttgctgc
2221 ttcacttctt tgtaaagtta agttgtaacc tgatggtaat tagctggctt cattattttt
2281 gtagtacaac cgatatgttc attagaattc tttgcattta atgttgatac tgtaagggtg
2341 tttcgttccc tttaaatgaa tcaacactgc caccttctgt acgagtttgt ttgttttttt
2401 tttttttttt tttttgcttg gcgaaaacac tacaaaggct gggaatgtat gtttttataa
2461 tttgtttatt taaatatgaa aaataaaatg ttaaactttt aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaa
//