LOCUS BC057291 4488 bp mRNA linear HTC 14-APR-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5274358.
ACCESSION BC057291
VERSION BC057291.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4488)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4488)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 12
This clone has the following problem: no 5' EST match.
FEATURES Location/Qualifiers
source 1..4488
/db_xref="H-InvDB:HIT000259678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5274358"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1042 a 1237 c 1087 g 1122 t
ORIGIN
1 ggaagaccga gacagcggag aggttgcggg tgagctgcgc tgagcccagg agccgaggag
61 tcgggagcgc agcgcagccc gagcccgagc ccgagcggcc ccgcgtcccg agcgcatcgg
121 agcggccgag ccgcccggcg cagcgcctgt cccgggcagc gcagccccgg ccgcaggatc
181 tcacccaagg tggcagaagg aggccttctg gagctgaccc acccccgacg accatcaggg
241 tgaggcaact ccaaggtcct actctctttc tgtgcctgtt acccaccccg tcctcctagg
301 gtgcccttga gccgcaaaac tgctgtccac gtggaccggg ggtgacatcg cacgtccatc
361 tgccaggacc cctgcgtcca aattccgaga catggcgacc aacggcagca aggtggccga
421 cgggcagatc tccaccgagg tcagcgaggc ccctgtggcc aatgacaagc ccaaaacctt
481 ggtggtcaag gtgcagaaga aggcggcaga cctccccgac cgggacacgt ggaagggccg
541 cttcgacttc ctcatgtcct gtgtgggcta tgccatcggc ctgggcaacg tctggaggtt
601 cccctatctc tgcgggaaaa atggtggggg agccttcctg atcccctatt tcctgacact
661 catctttgcg ggggtcccac tcttcctgct ggagtgctcc ctgggccagt acacctccat
721 cggggggcta ggggtatgga agctggctcc tatgttcaag ggcgtgggcc ttgcggctgc
781 tgtgctatca ttctggctga acatctacta catcgtcatc atctcctggg ccatttacta
841 cctgtacaac tccttcacca cgacactgcc gtggaaacag tgcgacaacc cctggaacac
901 agaccgctgc ttctccaact acagcatggt caacactacc aacatgacca gcgctgtggt
961 ggagttctgg gagcgcaaca tgcatcagat gacggacggg ctggataagc caggtcagat
1021 ccgctggcca ctggccatca cgctggccat cgcctggatc cttgtgtatt tctgtatctg
1081 gaagggtgtt ggctggactg gaaaggtggt ctacttttca gccacatacc cctacatcat
1141 gctgatcatc ctgttcttcc gtggagtgac gctgcccggg gccaaggagg gcatcctctt
1201 ctacatcaca cccaacttcc gcaagctgtc tgactccgag gtgtggctgg atgcggcaac
1261 ccagatcttc ttctcatacg ggctgggcct ggggtccctg atcgctctcg ggagctacaa
1321 ctctttccac aacaatgtct acagggactc catcatcgtc tgctgcatca attcgtgcac
1381 cagcatgttc gcaggattcg tcatcttctc catcgtgggc ttcatggccc atgtcaccaa
1441 gaggtccatt gctgatgtgg cggcctcagg ccccgggctg gcgttcctgg cataccaaga
1501 ggcggtgacc cagctgccta tctccccact ctgggccatc ctcttcttct ccatgctgtt
1561 gatgctgggc attgacagcc agttctgcac tgtggagggc ttcatcacag ccctggtgga
1621 tgagtacccc aggctcctcc gcaaccgcag agagctcttc attgctgctg tctgcatcat
1681 ctcctacctg atcggtctct ctaacatcac tcaggggggt atttatgtct tcaaactctt
1741 tgactactac tctgccagtg gcatgagcct gctgttcctc gtgttctttg aatgtgtctc
1801 tatttcctgg ttttacggtg tcaaccgatt ctatgacaat atccaagaga tggttggatc
1861 caggccctgc atctggtgga aactctgctg gtctttcttc acaccaatca ttgtggcggg
1921 cgtgttcatt ttcagtgctg tgcagatgac gccactcacc atgggaaact atgttttccc
1981 caagtggggc cgggtgtggg ctggctgatg gctctgtctt ccatggtcct catccccggg
2041 tacatggcct acatgttcct caccttaaag ggctccctga agcagcgcat ccaagtcatg
2101 gtccagccca gcgaagacat cgttcgccca gagaatggtc ctgagcagcc ccaggcgggc
2161 agctccacca gcaaggaggc ctacatctag ggtgggggcc actcaccgac ccgacactct
2221 caccccccga cctggctgag tgcgaccacc acttgatgtc tgaggatacc ttccatctca
2281 acctacctcg agtggcgagt ccagacacca tcaccacgca gagaggggag gtgggaggac
2341 agttagaccc ctgggtgggc cctgccgtgg gcaaggatac ccggtggctt ctggcacctg
2401 gcgggctggt gaccttttta atccaggccc catcagcatc ccacgatcgg ccttggtaac
2461 cgccgcggta gatcattttt atcccgccag ggagtgtgat gcaggaagac cacatgcgct
2521 cctgactttt aaacctgttc ctgactgttc tcttactgcc gaaacacttg actgttatct
2581 cggactttgc aggagttcct ttccctccga acgctgctcc atgcacagga aaagggcatt
2641 ttgtacaatg gggacttccc gggaacgctt gctcttaagt accagaagcc ggcggagctc
2701 tggctttcgt gtttttggtt ttctccttcc caaggcagct ggattgaaaa aacaaaacaa
2761 aacaaaaaaa cccaggggcg tcagtcgata ttcccagggc cgcttctcct gcagtctgtg
2821 gagcgtcctt gtccccgccg ccggaatgaa tgagcattct gcagcccgat gtccctgtcc
2881 cctcctcgcc gggccattct gattggacct ggcccagtgc aatctgtcca gacaagccct
2941 gcttgctgga aaactgccac aagcacaatt gatctctttt tatcgccatt ccaggggcct
3001 caggtcctac tggggaaact tcctataccg gagctccagt ttctcttaat ctgcccaatt
3061 tcacagagta caaaatagtt gtaggggaaa tcaaggtgaa ggatctgtcc gacagtcaag
3121 acggatccac agtaatcttt cggtctcctt aaactaccac cctcgctgcc acccacccca
3181 agctgctgcc gcctcacctt ccttgaaatt tctcagcggg agtctcctca ctgccactaa
3241 aacccaccca gcccactaac tgaggagcta gtgttaatcc agagaacccc ccgcaatgtg
3301 cttccgagat tcagactgct tcattgggaa gtatgatttg ttcctttctg gaattgggct
3361 ccgtggtggc ggcggcactt caagcaaaga cagtttcttg caagctccag tagctccgcg
3421 tgtctcattt gccaggaaga tgggttccca cgtagcaaat cgtacattgt gccctgtagc
3481 tccttagcta gttagctcac aagccgtgtt ttatgactaa tccttaataa ctatggtaaa
3541 taactgtgac tgtggggttt ttaatctctt gtcattctca tccaaaagtg accagcatac
3601 cagttcttgc aataagatat taccctcaga atattaagca cattattgta gagaaaaaaa
3661 aatatgtgta cacatatgaa cgcacaacat gcacattcat cctcacatgt ggcacgtaag
3721 gtctcatttg atattgtgta ggaaatctga agccttttcc tgaggtcatc tgtaaaatag
3781 tctcattgcc aaggcatccc cagtgccagc tggtgaatcc atgatcaaaa tgcatacgta
3841 ttgttaaatg ataaggttta gaatgacagg aacccatcac tgtgtctcat ggtcccactt
3901 ccccatctgt gtgtgaattc ctttagacta agggcaggaa gacttccagc tttctctttg
3961 ttcttcaatg tgaaactgag accaagtctc tctaagacaa atgcagtgta tttaatgttt
4021 gtaagcaatt ctaagtgaga tgtttggcaa gaaatcccct aactgatttc catccaaacc
4081 taccttatag agcacaatat taagtgttgt acaattactg tgagaactgt gaatatgtgt
4141 aacttttttt tagtatttgc ccggggggaa aaagatattg tattatcata tatgcttttt
4201 tgcaataagg atttattctc agaacaccaa gtaaatctat ctctatataa aaaatatatg
4261 taatatatac atattcaaag tatatacaga gcctgtttta aaaaatacag tattatttag
4321 taaaattatc tgttctatgg acaaaatgta aaatatttat aaatgaagat gcattttaaa
4381 tgtctataaa tggtgtcata actagagcac gggcgttatg taagtttcta agaatttaga
4441 ggataaataa taaaggttct atgatataaa aaaaaaaaaa aaaaaaaa
//