LOCUS BC057229 1188 bp mRNA linear HUM 04-NOV-2003
DEFINITION Homo sapiens A kinase (PRKA) anchor protein 5, mRNA (cDNA clone
IMAGE:5810750), partial cds.
ACCESSION BC057229
VERSION BC057229.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1188)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1188)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21493042.
FEATURES Location/Qualifiers
source 1..1188
/db_xref="H-InvDB:HIT000259654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5810750"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1188
/gene="AKAP5"
/gene_synonym="AKAP75"
/gene_synonym="AKAP79"
/gene_synonym="H21"
/db_xref="GeneID:9495"
/db_xref="MIM:604688"
CDS 293..>1188
/gene="AKAP5"
/gene_synonym="AKAP75"
/gene_synonym="AKAP79"
/gene_synonym="H21"
/codon_start=1
/product="AKAP5 protein"
/protein_id="AAH57229.1"
/db_xref="GeneID:9495"
/db_xref="MIM:604688"
/translation="METTISEIHVENKDEKRSAEGSPGAERQKEKASMLCFKRRKKAA
KALKPKAGSEAADVARKCPQEAGASDQPEPTRGAWASLKRLVTRRKRSESSKQQKPLE
GEMQPAINAEDADLSKKKAKSRLKIPCIKFPRGPKRSNHSKIIEDSDCSIKVQEEAEI
LDIQTQTPLNDQATKAKSTQDLSEGISRKDGDEVCESNVSNSITSGEKVISVELGLDN
GHSAIQTGTLILEEIETIKEKQDVQPQQASPLETSETDHQQPVLSDVPPLPAIPDQQI
VEEASNSTLESAPKKKKKKKKK"
misc_feature 509..601
/gene="AKAP5"
/gene_synonym="AKAP75"
/gene_synonym="AKAP79"
/gene_synonym="H21"
/note="PkinA_anch; Region: Protein kinase A anchor"
/db_xref="CDD:pfam03832"
BASE COUNT 456 a 225 c 264 g 243 t
ORIGIN
1 ggggttggcc aaggaccccg acgccctacg ttgatcttta aataaagcaa aaatttatcc
61 aaagaagggc tttcatcaag aaattaaaga gagaaattac aagccataga gaaactgggc
121 atttctatac tagagaaacc acctaaaaca actgtatgga gtaagatgaa aggtatgaat
181 atgcctggaa gaaattttac ctagtgtgac atttttgctc atctttttgt cacaaaaggc
241 tgctaaggaa gagagaatac agttttctag agaataagag tgcagtgtaa aaatggaaac
301 cacaatttca gaaattcatg tagaaaacaa ggatgagaag agatcagcag aaggtagtcc
361 tggggctgaa aggcagaagg aaaaggcatc catgctttgc ttcaagagaa gaaagaaagc
421 agccaaagca ctgaagccca aagctggctc tgaagctgct gatgtggcaa ggaagtgtcc
481 acaagaagca ggagcttctg atcagccaga gcccacacgg ggggcctggg cctcactcaa
541 acgtcttgta acacgcagga aaaggtcaga gtcttcaaag cagcaaaagc cattggaggg
601 tgaaatgcaa cctgcaataa atgctgagga tgctgatctt tctaagaaaa aggcaaaatc
661 tagacttaag attccctgca taaaattccc aagagggcca aaaaggagta atcattccaa
721 aattatagaa gactcagact gcagcatcaa agtccaggaa gaagctgaaa ttttggatat
781 acaaacacag accccattga atgatcaggc aacaaaggct aagtcaaccc aggatctaag
841 tgaaggcatc tcacggaaag atggtgatga ggtctgtgaa tcaaatgtga gcaatagcat
901 aacttctgga gagaaagtga tttcagtaga acttggatta gataatgggc attctgctat
961 tcaaacggga actctaatcc ttgaagaaat tgaaacgatc aaggaaaaac aagatgttca
1021 accccagcaa gcaagcccac ttgaaacttc agaaacagac catcagcagc cagtactttc
1081 tgatgttcct cctttacctg caattccaga tcaacaaatt gtggaagaag ccagtaacag
1141 taccctagaa agtgcaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//