LOCUS BC056908 1880 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 145, mRNA (cDNA clone
MGC:65163 IMAGE:6158428), complete cds.
ACCESSION BC056908
VERSION BC056908.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1880)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1880)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476062.
FEATURES Location/Qualifiers
source 1..1880
/db_xref="H-InvDB:HIT000259633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65163 IMAGE:6158428"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1880
/gene="C6orf145"
/db_xref="GeneID:221749"
/db_xref="HGNC:HGNC:21361"
CDS 172..867
/gene="C6orf145"
/codon_start=1
/product="chromosome 6 open reading frame 145"
/protein_id="AAH56908.1"
/db_xref="GeneID:221749"
/db_xref="HGNC:HGNC:21361"
/translation="MASAVFEGTSLVNMFVRGCWVNGIRRLIVSRRGDEEEFFEIRTE
WSDRSVLYLHRSLADLGRLWQRLRDAFPEDRSELAQGPLRQGLVAIKEAHDIETRLNE
VEKLLKTIISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEIMRS
NGFCLANTETIVIDHSIPNGRDQHLGVDPTEHLFENGSEFPSELEDGDDPAAYVTNLS
YYHLVPFETDIWD"
BASE COUNT 413 a 530 c 535 g 402 t
ORIGIN
1 cgccgccccg ctgccccgaa cgcgggccat acgcagcctc cttggagtga cgggccgacc
61 ccggacgacc ccggccacgg acagacccgg gacgaccccg gccggggcgc gcctcctgcg
121 ggcgggcggg cggcggggct ggggagccct tggcgggggc atgcgtgcga catggcctcg
181 gcggtgtttg agggcacgtc gctcgtgaac atgttcgtgc gcggctgctg ggtgaacggc
241 atccgcaggc tcatcgtcag ccggcgcggc gacgaagagg agttcttcga gatccgcacg
301 gagtggtcgg accgcagcgt gctctacctg caccgcagcc tggcggacct gggccgcctg
361 tggcagcgcc tgcgcgacgc ctttcccgag gaccggtccg aactggcgca ggggccgctg
421 cggcaaggac tggttgccat aaaggaagcc cacgacatag agaccaggct taatgaggtg
481 gagaagctgc tgaagacgat cataagcatg ccctgtaaat attctagatc ggaagttgtg
541 ctcaccttct tcgaaagatc tcctctggat caggtgttaa aaaatgataa tgtgcataaa
601 attcaaccca gctttcaaag tccagtcaaa atatcagaaa tcatgaggtc caatggattt
661 tgtttagcaa ataccgaaac aatagttatt gaccacagta taccaaatgg aagagaccag
721 cacctgggcg tggacccaac agagcattta tttgagaatg gcagtgagtt tccctcagag
781 ctggaggacg gggacgaccc agcagcctac gtcaccaacc tgtcatatta ccacctggtc
841 cccttcgaga cagacatttg ggactgaacc tctctatcag gcctcccccg cctcagctgt
901 tcactgccag ctctgatgct gtccactgtg ctggccccca tggtcacagc tgctgaccca
961 gctctggaac tcccagacgt cccaggcccc actgacgcca ggaggcctgg gtgtcctgca
1021 agtggagcag caggggctcc tagtgggcca ggctgaccgc agagtctcca gcaagctgag
1081 gtcacagccg gaggccacag ggcctgtgtt ctgagggtct tcactccctg cttggtgccc
1141 acagggctgc gcactgccag ggcagggaca gttcctgtgg ggctcgctct cactgctact
1201 gcttcctggg aggtgcatcc ctcttggtga agtggcctag tgccccccag ccaccctgac
1261 tccccaccat tccctcccac ggcaaacgca caaaacgtct tgagggagat tttgacaagt
1321 cacccattcc aggtgccaca ggcaggggat gtttagtaat ccaggatttc tctgagaact
1381 gggatatgtg gccttttttt ttttcttttt atcttttatc tggaaactgg gtttgggtca
1441 accccaggag tatttgcaga aggcccagca cagtgggggg tattggctgc agggcaggga
1501 aggcattgcc gactagataa ccgtgtgagc ttggactgag cgttggtggt tcttcccaaa
1561 ggaaaggaat ttctcccggc ctgccaggtc tctgggcctt cagcgcgggt cctggtgctg
1621 cggccacacc accctggggt gctcattgac agagctgcca taatgaactt gaaaggacgg
1681 gaatcacgag ggaagctggg gctcccctgc ccacaggaga ggatccccgt tcttcaagct
1741 tctctgctca gtgtctacta acgaccgaca tttgctaatg taaataatag taaattattg
1801 agaattctaa ttcttttaca cagtctgttt ttaatctatt ttaattaaat aaaatctatg
1861 actctaaaaa aaaaaaaaaa
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