LOCUS BC056906 612 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens general transcription factor IIH, polypeptide 5, mRNA
(cDNA clone MGC:65153 IMAGE:4446165), complete cds.
ACCESSION BC056906
VERSION BC056906.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 612)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 612)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: b Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46359854.
FEATURES Location/Qualifiers
source 1..612
/db_xref="H-InvDB:HIT000259631"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65153 IMAGE:4446165"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..612
/gene="GTF2H5"
/gene_synonym="bA120J8.2"
/gene_synonym="TFB5"
/gene_synonym="TGF2H5"
/gene_synonym="TTD-A"
/gene_synonym="TTDA"
/db_xref="GeneID:404672"
/db_xref="HGNC:HGNC:21157"
/db_xref="MIM:608780"
CDS 71..286
/gene="GTF2H5"
/gene_synonym="bA120J8.2"
/gene_synonym="TFB5"
/gene_synonym="TGF2H5"
/gene_synonym="TTD-A"
/gene_synonym="TTDA"
/codon_start=1
/product="general transcription factor IIH, polypeptide 5"
/protein_id="AAH56906.1"
/db_xref="GeneID:404672"
/db_xref="HGNC:HGNC:21157"
/db_xref="MIM:608780"
/translation="MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVF
VIAELVNVLQERVGELMDQNAFSLTQK"
BASE COUNT 239 a 99 c 119 g 155 t
ORIGIN
1 ggcaacgccg aggcgcttct gcatctgtgg gccgagcatt cttcaggtca tctgaacctt
61 ctgagaaaac atggtcaacg tcttgaaagg agtgcttata gaatgtgatc ctgccatgaa
121 gcagtttctg ctgtacttgg atgagtccaa tgccctgggg aagaagttca tcattcaaga
181 cattgatgac actcacgtct ttgtaatagc agaattggtt aatgtcctcc aggagcgagt
241 gggtgaatta atggaccaaa atgctttttc ccttacccag aaatgaaaat actcaatatg
301 gaccatttag gaattataag cagcaactgt gaaagacttg ccactcaata tcttaggtga
361 ctgattagac atagagggtt gttttaggag catgccacgg gaaagactga gggatcatga
421 tcatttgttc agaaaaaaag cccctgaact gattttgtta ccatagaatt taaaaaaaaa
481 aaaagcttta acagttggct gtaatttggc ttttattatc ctttattaaa atacaaatgt
541 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaaaaaaaaa aa
//