LOCUS BC056887 4511 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens family with sequence similarity 13, member B, mRNA
(cDNA clone MGC:65022 IMAGE:6148274), complete cds.
ACCESSION BC056887
VERSION BC056887.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4511)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4511)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706136.
FEATURES Location/Qualifiers
source 1..4511
/db_xref="H-InvDB:HIT000259612"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65022 IMAGE:6148274"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4511
/gene="FAM13B"
/gene_synonym="KHCHP"
/gene_synonym="N61"
/db_xref="GeneID:51306"
/db_xref="HGNC:HGNC:1335"
/db_xref="MIM:609371"
CDS 110..2857
/gene="FAM13B"
/gene_synonym="KHCHP"
/gene_synonym="N61"
/codon_start=1
/product="family with sequence similarity 13, member B"
/protein_id="AAH56887.1"
/db_xref="GeneID:51306"
/db_xref="HGNC:HGNC:1335"
/db_xref="MIM:609371"
/translation="MRKSSSPSLSNCNSVLANKIFGIPLDELQQGGHPDNEVPFIVRH
VVDYIEEHGGLEQQGLFQVNGNAETVEWLRQRYDSGEEVDLVKEADVPSAISLLRFFL
QELPEPVIPGSLHIHLMQLSQDYNNEDEFGRKLRFLLQQLPPVNYSLLKFLCRFLANV
ASHHEEIWSANSLAAVFGPDVFHIYTDVEDMKEQEIVSRIMAGLLENYYEFFENEEED
FSSNDLSSITEQVNELSEEEEEDEKLEHIEELPEEGAEKSNDMPEVVQLRMTENILES
NSVTATSTHISPISILPASTDILERTIRAAVEQHLFDLQSSIDHDLKNLQQQSVVCNN
EAESIHCDGEGSNNQIDIADDIINASESNRDCSKPVASTNLDNEAMQQDCVFENEENT
QSVGILLEPCSDRGDSEDGCLEREEYLLFDSDKLSHLILDSSSKICDLNANTESEVPG
GQSVGVQGEAACVSIPHLDLKNVSDGDKWEEPFPAFKSWQEDSESGEAQLSPQAGRMN
HHPLEEDCPPVLSHRSLDFGQSQRFLHDPEKLDSSSKALSFTRIRRSSFSSKDEKRED
RTPYQLVKKLQKKIRQFEEQFERERNSKPSYSDIAANPKVLKWMTELTKLRKQIKDAK
HKNSDGEFVPQTRPRSNTLPKSFGSSLDHEDEENEDEPKVIQKEKKPSKEATLELILK
RLKEKRIERCLPEDIKKMTKDHLVEEKASLQKSLLYYESQHGRPVTKEERHIVKPLYD
RYRLVKQMLTRASITPVLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSE
LGDMLKTAVQVQSSLENSESDVEENQEKLALDLRLSSSRAASMPELLEQLWKARAEKK
KLRKTLREFEEAFYQQNGRNAQKEDRVPVLEEYREYKKIKAKLRLLEVLISKQDSSKS
I"
BASE COUNT 1452 a 815 c 949 g 1295 t
ORIGIN
1 aaaagaatgc ttgctcagtg agggtagctg gtgcagaagc cattttttaa acttaggtat
61 ttaagtactg aaagaaaaga cagctttgat ttctggctgc aaaaaagata tgaggaagag
121 ctcctcccct tccttgagta actgcaactc cgttcttgct aacaaaatat ttggaattcc
181 acttgatgag ctgcagcagg gaggacatcc agacaatgag gttccattca tagtccgcca
241 cgttgtggac tatattgagg aacatggagg tctggagcaa caaggacttt ttcaagtcaa
301 tggaaatgct gagacagtgg agtggcttcg gcagagatac gacagcggag aagaggtgga
361 tttggttaag gaagcagatg ttccctcagc tattagcctt cttagatttt ttcttcaaga
421 acttcctgaa cctgttatcc ctggcagttt acatattcac ttgatgcagc tttctcaaga
481 ttataataat gaagatgaat ttggaagaaa gttgaggttc ctcttgcaac agcttccacc
541 tgttaattat agtttgttaa agtttctgtg tagattttta gccaatgtag catcacatca
601 tgaagaaatt tggtctgcaa attctttggc tgctgtcttt ggtccagatg tcttccacat
661 ttacacagat gtggaagaca tgaaagagca agaaatagtg agcaggataa tggctggact
721 tctggaaaac tactatgagt tttttgagaa tgaagaggaa gatttttcat ctaatgattt
781 gagttcaatt actgaacagg ttaatgaact ttctgaggaa gaagaggaag atgaaaagct
841 ggaacatatt gaagaacttc cagaagaggg tgcagaaaaa tcaaatgaca tgccagaggt
901 ggtacaatta aggatgactg aaaacatcct ggaatcaaat agtgttacgg caacaagcac
961 ccatatatct cccatcagca tcctaccagc ctctacagat attttagaaa gaacaattag
1021 agcagctgtg gaacagcacc tttttgatct tcagagcagc atagatcatg atcttaagaa
1081 tttacaacag caaagtgtgg tgtgtaataa tgaagcagaa agtattcatt gtgatgggga
1141 aggatctaat aaccagattg atattgctga tgatattatt aatgccagtg aaagtaacag
1201 agactgttca aaacctgtgg ctagcactaa tttagacaat gaagctatgc agcaagattg
1261 tgtatttgag aatgaagaaa atacccagtc tgtaggtata ttgttagagc catgcagtga
1321 ccgtggtgat agtgaagatg gctgtcttga gagggaagaa tatttgttat ttgacagtga
1381 taaattgtca cacttgattc tggattctag tagcaagata tgtgatttga atgccaacac
1441 tgaatcagaa gtaccaggag gtcagagtgt tggtgttcaa ggggaagcag cgtgtgtcag
1501 tattccacat ttagatctga agaatgtttc tgatggtgat aaatgggaag agccatttcc
1561 tgcttttaag tcttggcagg aggactctga gtctggagaa gctcagctgt ctccacaagc
1621 tggaagaatg aatcatcacc ccttggaaga ggactgtcct ccagtattat cacaccgcag
1681 tttagatttt ggtcaaagcc agcgtttcct acatgatcca gaaaagttgg attcctcatc
1741 taaagcactg tcttttacta gaattcgaag atcatccttt agttcaaaag atgaaaagag
1801 agaggacaga acaccttatc agctggtcaa gaaacttcag aagaaaatca gacaatttga
1861 ggaacagttt gaaagggaaa gaaatagcaa gccctcctac agtgatattg ctgccaatcc
1921 aaaggtatta aaatggatga cagagcttac aaaactgcgg aagcaaatta aagatgcaaa
1981 acacaaaaat tctgatggag aatttgtacc tcagacacgt ccacgtagta acacacttcc
2041 aaaaagcttt ggctcttctc tagaccatga agatgaagag aatgaagatg aacccaaggt
2101 cattcagaag gagaaaaaac catctaaaga agcaaccctt gaacttattc ttaaaagact
2161 gaaagaaaaa cgtattgaga ggtgtcttcc agaagatatc aagaaaatga ccaaagatca
2221 tttggtagaa gagaaagctt ctcttcagaa aagtcttctt tactatgaaa gtcaacatgg
2281 aaggccggtg accaaggaag aaaggcacat tgttaaacct ctctatgata gatacaggct
2341 tgtaaaacaa atgctgacaa gagctagcat cactcctgtc cttggatctc catccaccaa
2401 gcgaaggggt cagatgttac agccaatcat agaaggagaa actgcacatt tttttgaaga
2461 aatcaaggag gaagaagaag atggtgttaa tctgtcctct gagttaggtg atatgttgaa
2521 aactgcagta caggtacagt cttcattaga aaactctgaa tctgatgttg aagaaaatca
2581 agaaaaactg gctctggatc tccgattgtc aagttctcga gcagcttcta tgcctgaatt
2641 attggaacaa ctttggaaag ccagagctga aaaaaagaaa ctacgcaaaa cgttgcggga
2701 atttgaagaa gcattttatc aacaaaatgg aaggaatgcc cagaaagagg atcgtgttcc
2761 agtgcttgag gagtacagag agtacaagaa aattaaagcc aagcttaggc ttcttgaagt
2821 tcttataagc aaacaagatt cttcaaaatc catataagat acgttccttg aaaattcata
2881 tcataaagtc agttgtattc cttgaagcta tcatcgtgtg tacttggctg gtacttaaat
2941 tcgttttgtc aggcactcag agaatctcat tttgtacttg gttgtggtgc cactaaacaa
3001 aacaaatgat gggagagtaa gtaggccctc tcaagggagc gtaagtgatg ttccatatta
3061 accacagact gtcctctcca cctttagcaa acatatggtt tacttcattg ttttgtacta
3121 cagatacatc cttttagcaa aagactggaa ttttatcctt tcaacttcaa gaactttgga
3181 aatgcaagct ttttgttatt accaactttt tgtttctcat tactgaagaa aattggagga
3241 aaatcttcat actgaattct tctgttgcct ttttcttaca gaatgactga aaatttgaaa
3301 gaaaagccta taaaagtgca catacgcaac tgtgttctct gtttttccta gaaaaccaaa
3361 atcaaactga gatttcaagt cgtactatgg aacacctttc tgtttaattc ccaaagtgac
3421 atcttctcac aggtagtatg ttagtaaaat tttgcaattc gctggtcaca cagctcccgg
3481 atgaagataa cagttggtag accaaaaggt gacctcgctt agtatattga aaacacacac
3541 cacacatcac acacagaact gaatcatacc acgtgctgcc tatgggactt cagttactgt
3601 ttcctgagtt actgtttatc cgctggcaat ggtgtgattt gtctggatca gatccgtgct
3661 attccccaac ccacctccag ataatgtgag aaaatagcca tgtcagtatg taggaactct
3721 gatggtgctc agatttgtgt gttcaatcaa tgggcttaaa tcagcaaaat attatgccta
3781 aagtaaatct gttcttaaca agggctctac cactgcattt tcacatgtac cttcaggggg
3841 ttatcttttt ttttttcccc tcctatttta atcagcaaaa tccataccaa aacaacgaca
3901 acaacgccct cttaagggac caccctttgg tcaatcataa catgctgttt aaagcagctg
3961 tttacaggat gtgtagtggt atgccccttg tcatatactc ttagcatatc tttttttcct
4021 ttggctttgc atggcttttc ttcaggtact gtctcggtat cattctgcta atcattgtta
4081 cagaatggtg acttcatttg tgctaacagt acaacagcag atttgggtca ggcttaatct
4141 aagtgttaac ttttttttct ggtgcttttt tggattgatg actgtctcac tttgactata
4201 cccatgtttt gcatgcaatg actcatgcat ggttttctta actagctaat attaacaatt
4261 tattccatat aaaaatggaa ttttgcaaca tcctttaata aggtgaggga agcatgaacc
4321 tcagacttct ggcactatta catagtaagc acatgaagta gtttgataat aaatagcagt
4381 tctagtactt cacatttcac ccgtgtgtgc aatgcctttt tctggggggt ggggggtgag
4441 ggaaaacctg gtagtgaatg tgtagttggg gaataaagaa aagcactaaa tcctaaaaaa
4501 aaaaaaaaaa a
//