LOCUS BC056876 2025 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 13 open reading frame 34, mRNA (cDNA clone
MGC:64950 IMAGE:6473892), complete cds.
ACCESSION BC056876
VERSION BC056876.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2025)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2025)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505206.
FEATURES Location/Qualifiers
source 1..2025
/db_xref="H-InvDB:HIT000259601"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64950 IMAGE:6473892"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2025
/gene="C13orf34"
/gene_synonym="FLJ22624"
/gene_synonym="RP11-342J4.2"
/db_xref="GeneID:79866"
/db_xref="HGNC:HGNC:24724"
CDS 98..1777
/gene="C13orf34"
/gene_synonym="FLJ22624"
/gene_synonym="RP11-342J4.2"
/codon_start=1
/product="chromosome 13 open reading frame 34"
/protein_id="AAH56876.2"
/db_xref="GeneID:79866"
/db_xref="HGNC:HGNC:24724"
/translation="MGDVKESKMQITPETPGRIPVLNPFESPSDYSNLHEQTLASPSV
FKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEE
FFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKSDAACQTLLSL
PVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHS
GVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPT
FSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMR
LQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEA
STHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE
PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNI
MDTVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP"
BASE COUNT 629 a 404 c 413 g 579 t
ORIGIN
1 gagtctatgc ctgtcgtgga agctggcctg gcccccggag ctccctggag tcggtactgg
61 gggcttcgtt ttgtacgcac cgttttctct ctgtgctatg ggagatgtca aggaatcaaa
121 gatgcaaata acaccagaaa ctccaggaag gatccctgtt ttaaatcctt ttgaaagtcc
181 tagtgattat tctaatctcc atgaacaaac tctcgccagt ccttctgttt ttaaatcaac
241 aaaattacca actccaggga aatttagatg gtctattgat caactagctg taataaatcc
301 tgtagaaata gacccagaag atattcatcg tcaagcttta tacttaagtc attctcgaat
361 agataaagat gtggaagaca aaagacaaaa agccattgaa gagtttttca ctaaagatgt
421 catcgtaccc tctccttgga ctgatcatga agggaaacag ctttcacaat gtcattccag
481 taaatgcact aacataaata gtgactctcc agttggaaaa aagctgacca ttcattctga
541 gaaaagcgat gctgcttgtc agacattgct gtctcttcct gtggatttta atttagaaaa
601 tatattaggt gactatttta gagctgatga atttgcagat caatctcctg gaaacctcag
661 ttcttcatcc ctcagaagaa agctgttttt agatgggaac ggaagcatct ccgactcctt
721 accttcggct tctcccggaa gtcctcacag tggtgttcaa acatcactag agatgtttta
781 ttcaatagat ttgtctcctg taaagtgtag gagccccttg cagacaccaa gttcggggca
841 gttttcttct agccctattc aggctagtgc aaaaaaatac agcttgggaa gcataactag
901 tccttcgcct atttcttcac ccactttctc accaattgaa tttcagatag gagagactcc
961 actctcagaa caaaggaagt ttactgttca ttctcctgat gcttcatctg gaacaaattc
1021 taatgggata actaatccgt gtatcagaag tccttatata gatggctgct cgccaattaa
1081 aaattggtct cctatgagac ttcagatgta tagtggtggt actcagtatc ggacctcagt
1141 gattcagata ccttttactc ttgagactca aggtgaagat gaggaagata aagagaatat
1201 tccttccaca gatgtctcat cacccgccat ggatgctgct ggaatacacc tacggcagtt
1261 tagtaatgag gcttctaccc atggtacaca tttggttgtg actgccatgt ctgttacaca
1321 aaatcagtcc agtgcttctg agaaagaatt agcactgttg caggatgttg aaagggagaa
1381 agacaataac actgtggata tggttgatcc tatagagata gcagatgaga ccacttggat
1441 taaggagccg gttgataatg gcagtttacc catgactgat tttgtaagtg gcattgcctt
1501 cagtattgaa aactctcata tgtgcatgtc acctcttgct gaaagcagtg tcattccttg
1561 tgaaagcagt aacattcaga tggatagtgg ctataatacg cagaattgtg gaagcaatat
1621 tatggataca gttggggcag aaagttactg caaagaaagt gatgcacaaa catgtgaagt
1681 tgagagtaaa tctcaagcat ttaatatgaa gcaagaccac acaacacaga ggtgttggat
1741 gaaaacagca agcccttttc aatgcagcag tccatagaat gcctctgtca gaatcaaaga
1801 ctaagcttaa gagttcctcg catatatcgt tgtgcacagg atcaacatga tggtgactgg
1861 gaaaaaatta cttcaagtaa catgcttagc tttccctcct taatgtgaaa aatcaagggc
1921 ttactgacat aggaacaaca gaaatgctcc tggaacttca agttgctgaa ttataagttt
1981 attttttatc aataaatatt tttatactta aaaaaaaaaa aaaaa
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