LOCUS BC056874 2405 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens thioredoxin-related transmembrane protein 1, mRNA
(cDNA clone MGC:64936 IMAGE:5740203), complete cds.
ACCESSION BC056874
VERSION BC056874.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222132.
FEATURES Location/Qualifiers
source 1..2405
/db_xref="H-InvDB:HIT000259599"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64936 IMAGE:5740203"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2405
/gene="TMX1"
/gene_synonym="PDIA11"
/gene_synonym="TMX"
/db_xref="GeneID:81542"
/db_xref="HGNC:HGNC:15487"
/db_xref="MIM:610527"
CDS 15..857
/gene="TMX1"
/gene_synonym="PDIA11"
/gene_synonym="TMX"
/codon_start=1
/product="thioredoxin-related transmembrane protein 1"
/protein_id="AAH56874.2"
/db_xref="GeneID:81542"
/db_xref="HGNC:HGNC:15487"
/db_xref="MIM:610527"
/translation="MAPSGSLAVPLAVLVLLLWGAPWTHGRRSNVRVITDENWRELLE
GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIITALPT
IYHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPVSSWFGPGSVLMSSMSALFQLSM
WIRTCHNYFIEDLGLPVWGSYTVFALATLFSGLLLGLCMIFVADCLCPSKRRRPQPYP
YPSKKLLSESAQPLKKVEEEQEADEEDVSEEEAESKEGTNKDFPQNAIRQRSLGPSLA
TDKS"
BASE COUNT 744 a 366 c 453 g 842 t
ORIGIN
1 gggcaagcgg cgaaatggcg ccctccggga gtcttgcagt tcccctggca gtcctggtgc
61 tgttgctttg gggtgctccc tggacgcacg ggcggcggag caacgttcgc gtcatcacgg
121 acgagaactg gagagaactg ctggaaggag actggatgat agaattttat gccccgtggt
181 gccctgcttg tcaaaatctt caaccggaat gggaaagttt tgctgaatgg ggagaagatc
241 ttgaggttaa tattgcgaaa gtagatgtca cagagcagcc aggactgagt ggacggttta
301 tcataactgc tcttcctact atttatcatt gtaaagatgg tgaatttagg cgctatcagg
361 gtccaaggac taagaaggac ttcataaact ttataagtga taaagagtgg aagagtattg
421 agcccgtttc atcatggttt ggtccaggtt ctgttctgat gagtagtatg tcagcactct
481 ttcagctatc tatgtggatc aggacgtgcc ataactactt tattgaagac cttggattgc
541 cagtgtgggg atcatatact gtttttgctt tagcaactct gttttccgga ctgttattag
601 gactctgtat gatatttgtg gcagattgcc tttgtccttc aaaaaggcgc agaccacagc
661 catacccata cccttcaaaa aaattattat cagaatctgc acaacctttg aaaaaagtgg
721 aggaggaaca agaggcggat gaagaagatg tttcagaaga agaagctgaa agtaaagaag
781 gaacaaacaa agactttcca cagaatgcca taagacaacg ctctctgggt ccatcattgg
841 ccacagataa atcctagtta aattttatag ttatcttaat attatgattt tgataaaaac
901 agaagattga tcattttgtt tggtttgaag tgaactgtga cttttttgaa tattgcaggg
961 ttcagtctag attgtcatta aattgaagag tctacattca gaacataaaa gcactaggta
1021 tacaagtttg aaatatgatt taagcacagt atgatggttt aaatagttct ctaatttttg
1081 aaaaatcgtg ccaagcaata agatttatgt atatttgttt aataataacc tatttcaagt
1141 ctgagttttg aaaatttaca tttcccaagt attgcattat tgaggtattt aagaagatta
1201 ttttagagaa aaatatttct catttgatat aatttttctc tgtttcactg tgtgaaaaaa
1261 agaagatatt tcccataaat gggaagtttg cccattgtct caagaaatgt gtatttcagt
1321 gacaatttcg tggtcttttt agaggtatat tccaaaattt ccttgtattt ttaggttatg
1381 caactaataa aaactacctt acattaatta attacagttt tctacacatg gtaatacagg
1441 atatgctact gatttaggaa gtttttaagt tcatggtatt ctcttgattc caacaaagtt
1501 tgattttctc ttgtattttt cttacttact atgggttaca ttttttattt ttcaaattgg
1561 atgataattt cttggaaaca ttttttatgt tttagtaaac agtatttttt tgttgtttca
1621 aactgaagtt tactgagaga tccatcaaat tgaacaatct gttgtaattt aaaattttgg
1681 ccactttttt cagattttac atcattcttg ctgaacttca acttgaaatt gttttttttt
1741 ttttttcttt ttggatgtga aggtgaacat tcctgatttt tgtctgatgt gaaaaagcct
1801 tggtatttta cattttgaaa attcaaagaa gcttaatata aaagtttgca ttctactcag
1861 gaaaaagcat cttcttgtat atgtcttaaa tgtatttttg tcctcatata cagaaagttc
1921 ttaattgatt ttacagtctg taatgcttga tgttttaaaa taataacatt tttatatttt
1981 ttaaaagaca aacttcatat tatcctgtgt tctttcctga ctggtaatat tgtgtgggat
2041 ttcacaggta aaagtcagta ggatggaaca ttttagtgta tttttactcc ttaaagagct
2101 agaatacata gttttcacct taaaagaagg gggaaaatca taaatacaat gaatcaactg
2161 accattacgt agtagacaat ttctgtaatg tccccttctt tctaggctct gttgctgtgt
2221 gaatccatta gatttacagt atcgtaatat acaagttttc tttaaagccc tctcctttag
2281 aatttaaaat attgtaccat tgaagagttt ggatgtgtaa cttgtgatgc cttagaaaaa
2341 tatcctaagc acaaaataaa cctttctaac cacttcatta aaaaaaaaaa aaaaaaaaaa
2401 aaaaa
//