LOCUS BC056871 3456 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens phospholipase D2, mRNA (cDNA clone MGC:64872 IMAGE:5526564), complete cds. ACCESSION BC056871 VERSION BC056871.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3456) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3456) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: f Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20070140. FEATURES Location/Qualifiers source 1..3456 /db_xref="H-InvDB:HIT000259596" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:64872 IMAGE:5526564" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3456 /gene="PLD2" /db_xref="GeneID:5338" /db_xref="HGNC:HGNC:9068" /db_xref="MIM:602384" CDS 36..2837 /gene="PLD2" /codon_start=1 /product="phospholipase D2" /protein_id="AAH56871.1" /db_xref="GeneID:5338" /db_xref="HGNC:HGNC:9068" /db_xref="MIM:602384" /translation="MTATPESLFPTGDELDSSQLQMESDEVDTLKEGEDPADRMHPFL AIYELQSLKVHPLVFAPGVPVTAQVVGTERYTSGSKVGTCTLYSVRLTHGDFSWTTKK KYRHFQELHRDLLRHKVLMSLLPLARFAVAYSPARDAGNREMPSLPRAGPEGSTRHAA SKQKYLENYLNRLLTMSFYRNYHAMTEFLEVSQLSFIPDLGRKGLEGMIRKRSGGHRV PGLTCCGRDQVCYRWSKRWLVVKDSFLLYMCLETGAISFVQLFDPGFEVQVGKRSTEA RHGVRIDTSHRSLILKCSSYRQARWWAQEITELAQGPGRDFLQLHRHDSYAPPRPGTL ARWFVNGAGYFAAVADAILRAQEEIFITDWWLSPEVYLKRPAHSDDWRLDIMLKRKAE EGVRVSILLFKEVELALGINSGYSKRALMLLHPNIKVMRHPDQVTLWAHHEKLLVVDQ VVAFLGGLDLAYGRWDDLHYRLTDLGDSSESAASQPPTPRPDSPATPDLSHNQFFWLG KDYSNLITKDWVQLDRPFEDFIDRETTPRMPWRDVGVVVHGLPARDLARHFIQRWNFT KTTKAKYKTPTYPYLLPKSTSTANQLPFTLPGGQCTTVQVLRSVDRWSAGTLENSILN AYLHTIRGSQHFLYIENQFFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLP LLPGFEGDISTGGGNSIQAILHFTYRTLCRGEYSILHRLKAAMGTAWRDYISICGLRT HGELGGHPVSELIYIHSKVLIADDRTVIIGSANINDRSLLGKRDSELAVLIEDTETEP SLMNGAEYQAGRFALSLRKHCFGVILGANTRPDLDLRDPICDDFFQLWQDMAESNANI YEQIFRCLPSNATRSLRTLREYVAVEPLATVSPPLARSELTQVQGHLVHFPLKFLEDE SLLPPLGSKEGMIPLEVWT" BASE COUNT 784 a 1014 c 952 g 706 t ORIGIN 1 ggaacccccg cgggcgctgg ctccgtctgc cagggatgac ggcgacccct gagagcctct 61 tccccactgg ggacgaactg gactccagcc agctccagat ggagtccgat gaggtggaca 121 ccctgaagga gggagaggac ccagccgacc ggatgcaccc gtttctggcc atctatgagc 181 ttcagtctct gaaagtgcac cccttggtgt tcgcacctgg ggtccctgtc acagcccagg 241 tggtgggcac cgaaagatat accagcggat ccaaggtggg aacctgcact ctgtattctg 301 tccgcttgac tcacggcgac ttttcctgga caaccaagaa gaaataccgt cattttcagg 361 agctgcatcg ggacctcctg agacacaaag tcttgatgag tctgctccct ctggctcgtt 421 ttgccgttgc ctattctcca gcccgagatg caggcaacag agagatgccc tctctacccc 481 gggcaggtcc tgagggctcc accagacatg cagccagcaa acagaaatac ctggagaatt 541 acctcaaccg tctcttgacc atgtctttct atcgcaacta ccatgccatg acagagttcc 601 tggaagtcag tcagctgtcc tttatcccgg acttgggccg caaaggactg gaggggatga 661 tccggaagcg ctcaggtggc caccgtgttc ctggcctcac ctgctgtggc cgagaccaag 721 tttgttatcg ctggtccaag aggtggctgg tggtgaagga ctccttcctg ctgtacatgt 781 gcctcgagac aggtgccatc tcatttgttc agctctttga ccctggcttt gaggtgcaag 841 tggggaaaag gagcacggag gcacggcacg gcgtgcggat cgatacctcc cacaggtcct 901 tgattctcaa gtgcagcagc taccggcagg cacggtggtg ggcccaagag atcactgagc 961 tggcacaggg cccaggcaga gacttcctac agctgcaccg gcatgacagc tacgccccac 1021 cccggcctgg gaccttggcc cggtggtttg tgaatggggc aggttacttt gctgctgtgg 1081 cagatgccat ccttcgagct caagaggaga ttttcatcac agactggtgg ttgagtcctg 1141 aggtttacct gaagcgtccg gcccattcag atgactggag actggacatt atgctcaaga 1201 ggaaggcgga ggagggtgtc cgtgtgtcta ttctgctgtt taaagaagtg gaattggcct 1261 tgggcatcaa cagtggctat agcaagaggg cgctgatgct gctgcacccc aacataaagg 1321 tgatgcgtca cccagaccaa gtgacgttgt gggcccatca tgagaagctc ctggtggtgg 1381 accaagtggt agcattcctg gggggactgg accttgccta tggccgctgg gatgacctgc 1441 actaccgact gactgacctt ggagactcct ctgaatcagc tgcctcccag cctcccaccc 1501 cgcgcccaga ctcaccagcc accccagacc tctctcacaa ccaattcttc tggctgggca 1561 aggactacag caatcttatc accaaggact gggtgcagct ggaccggcct ttcgaagatt 1621 tcattgacag ggagacgacc cctcggatgc catggcggga cgttggggtg gtcgtccatg 1681 gcctaccggc ccgggacctt gcccggcact tcatccagcg ctggaacttc accaagacca 1741 ccaaggccaa gtacaagact cccacatacc cctacctgct tcccaagtct accagcacgg 1801 ccaatcagct ccccttcaca cttccaggag ggcagtgcac caccgtacag gtcttgcgat 1861 cagtggaccg ctggtcagca gggactctgg agaactccat cctcaatgcc tacctgcaca 1921 ccatcagggg gagccagcac ttcctctaca ttgagaatca gttcttcatt agctgctcag 1981 atgggcggac ggttctgaac aaggtgggcg atgagattgt ggacagaatc ctgaaggccc 2041 acaaacaggg gtggtgttac cgagtctacg tgcttttgcc cttactccct ggcttcgagg 2101 gtgacatctc cacgggcggt ggcaactcca tccaggccat tctgcacttt acttacagga 2161 ccctgtgtcg tggggagtat tcaatcctgc atcgccttaa agcagccatg gggacagcat 2221 ggcgggacta tatttccatc tgcgggcttc gtacacacgg agagctgggc gggcaccccg 2281 tctcggagct catctacatc cacagcaagg tgctcatcgc agatgaccgg acagtcatca 2341 ttggttctgc aaacatcaat gaccggagct tgctggggaa gcgggacagt gagctggccg 2401 tgctgatcga ggacacagag acggaaccat ccctcatgaa tggggcagag tatcaggcgg 2461 gcaggtttgc cttgagtctg cggaagcact gcttcggtgt gattcttgga gcaaataccc 2521 ggccagactt ggatctccga gaccccatct gtgatgactt cttccagttg tggcaagaca 2581 tggctgagag caacgccaat atctatgagc agatcttccg ctgcctgcca tccaatgcca 2641 cgcgttccct gcggactctc cgggagtacg tggccgtgga gcccttggcc acggtcagtc 2701 cccccttggc tcggtctgag ctcacccagg tccagggcca cctggtccac ttccccctca 2761 agttcctaga ggatgagtct ttgctgcccc cgctgggtag caaggagggc atgatccccc 2821 tagaagtgtg gacatagttg aggcccccgt cagggagagg tcaccagctg ctgtgcccca 2881 ccacgtctgg ctccctgccc cttaacccca aggactgagg gcagtgccct ttgagatctg 2941 gggaggcagg cattcctgaa gggaactaga ggtgttacag aggaccctta cgtgagaaat 3001 agctgaaaag ggcactccca accctgggct ggggaggagg agagagtccc agagctcatc 3061 ccccctgctg cccagtgcaa accacttctc catgctgcaa aggagaagca cagctcctgc 3121 cagggtgagc agggtcaagc ctcttattcc aggagaaggg ggctctgccc caggccctac 3181 tacccattgt tcccttcctc ttcctgccct tgaaccccct ccctgtccca gggccctccc 3241 agcccattgc tgccaaggtg gagggaagga taaagccact tctggcttca gcccccacca 3301 ggggaaggaa ggagggcaca ttaactccct ccaccagcct gctgacagac actaactttg 3361 tatccgttca ataagcattt cataaataaa ggtgtagaaa aaaaaaaaaa aaaaaaaaaa 3421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //