LOCUS BC056422 3273 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens RAB5B, member RAS oncogene family, mRNA (cDNA clone
MGC:65122 IMAGE:6151079), complete cds.
ACCESSION BC056422
VERSION BC056422.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3273)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3273)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33943097.
FEATURES Location/Qualifiers
source 1..3273
/db_xref="H-InvDB:HIT000259556"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65122 IMAGE:6151079"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3273
/gene="RAB5B"
/db_xref="GeneID:5869"
/db_xref="HGNC:HGNC:9784"
/db_xref="MIM:179514"
CDS 111..758
/gene="RAB5B"
/codon_start=1
/product="RAB5B, member RAS oncogene family"
/protein_id="AAH56422.2"
/db_xref="GeneID:5869"
/db_xref="HGNC:HGNC:9784"
/db_xref="MIM:179514"
/translation="MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQ
FHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI
TNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFM
ETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN"
BASE COUNT 793 a 844 c 725 g 911 t
ORIGIN
1 ggggagacgg agccccagga gtgttgaagc ctggaaatcc cctccccttc cccctccccc
61 ctttacagta tccccctccc tccacccttt cccattctga taatctggcc atgactagca
121 gaagcacagc taggcccaat gggcaacccc aggccagcaa aatttgccag ttcaaattgg
181 tcctgctggg agaatctgca gtgggaaagt caagcctggt attacgtttt gtcaaagggc
241 agttccatga gtaccaggag agcaccattg gagcggcctt cctcacccag tccgtttgtc
301 tagatgacac aacagtgaag tttgagatct gggacacagc tgggcaggag cgatatcaca
361 gcttagcccc catgtactac aggggtgccc aagctgcaat cgtggtttac gacattacta
421 atcaggaaac ctttgcccga gcaaagacat gggtgaagga actacagcga caggccagtc
481 ctagcatcgt tattgccctg gcagggaaca aagctgacct ggccaacaaa cgtatggtgg
541 agtatgaaga ggcccaggca tatgcagatg acaacagctt attgttcatg gagacttcag
601 ccaagacagc tatgaacgtg aatgatctct tcctggcaat agctaagaag ttgccaaaga
661 gtgaacccca gaatctggga ggtgcagcag gccgaagccg gggtgtggat ctccatgaac
721 agtcccagca gaacaagagc cagtgttgta gcaactgagg gggtggctag cagcaaacaa
781 gtatggagct agcacaagag ctaagaaata acctccatcc ctacccctca gcacacaacc
841 cctacggtaa cagcacactg agccctggct cccaagggct gcctcctgac agctccgtca
901 tggcactttt taacgcttca gcaacaaaca ccaggcagct gttgccactg gcctcctacc
961 ccctactctg gggcttgggg gtcaactccc cccaggactt accttccaaa acaaactttc
1021 ttcactttgt attataggta caagacagcg acttacgtat cttttctcct cctccctagt
1081 gttcctcccc attttttcag aaaacacttc tgactcctgt cccttcccct tctgcttttg
1141 gtcagtccct gttcttgagc ctcttttctc ctccccccag gatgcagaaa gtggtgaacc
1201 caggaactga ggaaggaggt ttccagttca tttacattaa gggccctggg ggagaataaa
1261 gctcagagca ggagggagta aggaaacatt tcctttttgt ttttatttgg ttggagtttc
1321 tcatatttga aaacattgcg gtatccatga tttggccttg tggagggtgt tcctaggtag
1381 aggtgagaat ggggaggcaa gatctcaggc accaggcagg aggtgccttg taagctaact
1441 gggcggaggt ggaggtgcag tgtcaactgt ggctctgtaa ctcttcaaag gcccagtttc
1501 ccctcacgca gcctcttagg tagcgtttcc cctaatcgtg ggggttggac cccagagtct
1561 tccaaagaat tttcactggt tgcctgcatc tttggctctg ctgtgatctg attggaggag
1621 ggacagtttc tggtacccat cctctgattt atacatatgc attttttccc ctctggcctt
1681 tagatggcct cagccccagc caccatatac ccctgcagtt tgcactttaa ttgatggtag
1741 ttcagttggg gtacttgttt tatggaagtt ttgattgatt tacttgccct cccaccttct
1801 ttttaattca atgaaatctg aggttaatgc gaggttcgag gagaggttat agataaaact
1861 accagtggca gctactcaag tcctatctcc actgttagct tcctccaact ctaattatta
1921 acctatattc ttgccaagct aactattgac tataggtttg cctttcctgg agaattaatt
1981 gagcaattga ggagtgtctc aggatagcac aggccaaggt aggggagtaa aaaggaggtc
2041 aggcaaaagg gaggagtttt ctgtcctttc ccaggtttca cactcaattt gatatccatt
2101 accatgtctt ttctacttcc ttgtaaatag gtatgatctt tattcccact gtacagtctg
2161 ttctatcctc tgcctcccat caggccctgt ttctttgttc ctttgttaat atcttgaatt
2221 tagtccctcc atccttaatc cccccatccc tccccatcat gcaaccagtg gtttaatcca
2281 tgtaccaata ggggctagta ccacagaggc ctcctgtggt gccctcgtat cataccacct
2341 gttcctgtgg agagggaatg accggcactg aaggtacctt acaactggct catattatca
2401 gaggaccttg gtcctttcta aatctctagt ctctcttcat atccttcatc aggtgtttta
2461 agatgtctct gagaagccat caaggcaaaa gagaacttta agttccttgt tccagcccgg
2521 agttttggga aagaaagaaa ggaaaggtca cagtgaccta ggattggaac cttcctgccc
2581 ttttggcttg cagactgcct tctatcccag aacagctgag aaatctatga agctgagatt
2641 ctgaaggacc cagcttaggt tcttccactt aggcctcaat tcccttcctt ttccaggggc
2701 agccttagtt cccatggccc tgaaacacac acatttcccc cttcctttcc cagaagccac
2761 tggcccccca tagcacccag tgcatccttt ttacaagtgg aagaactagg atggctttcc
2821 aaagtcttct agaaatgaag ttctttctct gtgcagcttt cccccttgga gcaggagtga
2881 agatgtttca ttatcttggg cctgggaaac cacttcccca ggcttctccc tccccccacc
2941 cccataggaa caggatttgg ccttagcttc tgggcctatc ggctgccttc cctctacttc
3001 ctaccacctc ttctgccttc ctttgagctc tgttgggctt ggggatctta gttttctttt
3061 gtttatttcc cagctcattt ttttcttctg gtcagttttt ttaagggggg gtgttgtggt
3121 tttttgtttt tgttttgctt ctgagaaagc atttgccttt cttcctctcc caacataaca
3181 atcgtggtaa cagaatgcga ctgctgattt accgatgtat ttaatgtaag taaaaaaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//