LOCUS BC056419 2059 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens niacin receptor 1, mRNA (cDNA clone MGC:65083
IMAGE:5747743), complete cds.
ACCESSION BC056419
VERSION BC056419.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174460.
FEATURES Location/Qualifiers
source 1..2059
/db_xref="H-InvDB:HIT000259555"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65083 IMAGE:5747743"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2059
/gene="NIACR1"
/gene_synonym="HM74a"
/gene_synonym="HM74b"
/gene_synonym="Puma-g"
/gene_synonym="PUMAG"
/db_xref="GeneID:338442"
/db_xref="HGNC:HGNC:24827"
/db_xref="MIM:609163"
CDS 47..1138
/gene="NIACR1"
/gene_synonym="HM74a"
/gene_synonym="HM74b"
/gene_synonym="Puma-g"
/gene_synonym="PUMAG"
/codon_start=1
/product="niacin receptor 1"
/protein_id="AAH56419.1"
/db_xref="GeneID:338442"
/db_xref="HGNC:HGNC:24827"
/db_xref="MIM:609163"
/translation="MNRHHLQDHFLEIDKKNCCVFRDDFIVKVLPPVLGLEFIFGLLG
NGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFLMDNYVRRWDWKFGDIPCRL
MLFMLAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNRTAAIISCLLWGITIGLTV
HLLKKKMPIQNGGANLCSSFSICHTFQWHEAMFLLEFFLPLGIILFCSARIIWSLRQR
QMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAF
FITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKMTGEPDNNRSTSVELTGD
PNKTRGAPEALMANSGEPWSPSYLGPTSP"
BASE COUNT 486 a 522 c 526 g 525 t
ORIGIN
1 agcattcact aggcgaggcg ctccatcgga ctcactagcc gcactcatga atcggcacca
61 tctgcaggat cactttctgg aaatagacaa gaagaactgc tgtgtgttcc gagatgactt
121 cattgtcaag gtgttgccgc cggtgttggg gctggagttt atcttcgggc ttctgggcaa
181 tggccttgcc ctgtggattt tctgtttcca cctcaagtcc tggaaatcca gccggatttt
241 cctgttcaac ctggcagtgg ctgactttct actgatcatc tgcctgccct tcctgatgga
301 caactatgtg aggcgttggg actggaagtt tggggacatc ccttgccggc tgatgctctt
361 catgttggct atgaaccgcc agggcagcat catcttcctc acggtggtgg cggtagacag
421 gtatttccgg gtggtccatc cccaccacgc cctgaacaag atctccaatc ggacagcagc
481 catcatctct tgccttctgt ggggcatcac tattggcctg acagtccacc tcctgaagaa
541 gaagatgccg atccagaatg gcggtgcaaa tttgtgcagc agcttcagca tctgccatac
601 cttccagtgg cacgaagcca tgttcctcct ggagttcttc ctgcccctgg gcatcatcct
661 gttctgctca gccagaatta tctggagcct gcggcagaga caaatggacc ggcatgccaa
721 gatcaagaga gccatcacct tcatcatggt ggtggccatc gtctttgtca tctgcttcct
781 tcccagcgtg gttgtgcgga tccgcatctt ctggctcctg cacacttcgg gcacgcagaa
841 ttgtgaagtg taccgctcgg tggacctggc gttctttatc actctcagct tcacctacat
901 gaacagcatg ctggaccccg tggtgtacta cttctccagc ccatcctttc ccaacttctt
961 ctccactttg atcaaccgct gcctccagag gaagatgaca ggtgagccag ataataaccg
1021 cagcacgagc gtcgagctca caggggaccc caacaaaacc agaggcgctc cagaggcgtt
1081 aatggccaac tccggtgagc catggagccc ctcttatctg ggcccaacct ctccttaaat
1141 aaccatgcca agaagggaca ttgtcaccaa gaaccaggat ctctggagaa acagttgggc
1201 tgttgcatcg agtaatgtca ctggactcgg cctaaggttt cctggaactt ccagattcag
1261 agaatctgat ttagggaaac tgtggcagat gagtgggaga ctggttgcaa ggtgtgaccg
1321 caggaatcct ggaggaacag agagtaaagc ttctaggcat ctgaaacttt tgcttcatct
1381 ctgacgctcg caggactgaa gatgggcaaa ttgtaggcgt ttctgctgag cagagttgga
1441 gccagagatc tacttgtgac ttgttggcct tcttcccaca tctgcctcag actggggggg
1501 gctcagctcc tggggtgata tctagcctgc ttgtgagctc tagcagggat aaggagagct
1561 gagattggag ggaattgtgt tgctcctgga gggagcccag gcatcattaa acaagccagt
1621 aggtcacctg gcttccgtgg accaattcat ctttcagaca agctttagca gaaatggact
1681 cagggaagag actcacacgc tttggttaat atctgtgttt ccggtgggtg taatagggga
1741 ttagccccag aagggactga gctaaacagt gttattatgg gaaaggaaat ggcattgctg
1801 ctttcaacca gcgactaatg caatccattc ctctcttgtt tatagtaatc taagggttgg
1861 gcagttaaaa cggcttcagg atagaaagct gtttcccacc tctgtttgct tttaacatta
1921 aaagggaaat gtgcctctgc cccacagtta gaggggtgca cgttcctcct ggttccttcg
1981 cttgtgtttc tgtacttacc aaaaatctac catttcaata aattttgata ggagaaaaaa
2041 aaaaaaaaaa aaaaaaaaa
//