LOCUS BC056414 2347 bp mRNA linear HUM 23-JUL-2018
DEFINITION Homo sapiens plasmalemma vesicle associated protein, mRNA (cDNA
clone MGC:64932 IMAGE:6190596), complete cds.
ACCESSION BC056414
VERSION BC056414.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2347)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2347)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 2347)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jul 23, 2018 this sequence version replaced BC056414.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13775237.
FEATURES Location/Qualifiers
source 1..2347
/db_xref="H-InvDB:HIT000054166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64932 IMAGE:6190596"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2347
/gene="PLVAP"
/gene_synonym="FELS"
/gene_synonym="gp68"
/gene_synonym="PV-1"
/gene_synonym="PV1"
/db_xref="GeneID:83483"
/db_xref="HGNC:HGNC:13635"
/db_xref="MIM:607647"
CDS 39..1367
/gene="PLVAP"
/gene_synonym="FELS"
/gene_synonym="gp68"
/gene_synonym="PV-1"
/gene_synonym="PV1"
/codon_start=1
/product="plasmalemma vesicle associated protein"
/protein_id="AAH56414.1"
/db_xref="GeneID:83483"
/db_xref="HGNC:HGNC:13635"
/db_xref="MIM:607647"
/translation="MGLAMEHGGSYARAGGSSRGCWYYLRYFFLFVSLIQFLIILGLV
LFMVYGNVHVSTESNLQATERRAEGLYSQLLGLTASQSNLTKELNFTTRAKDAIMQMW
LNARRDLDRINASFRQCQGDRVIYTNNQRYMAAIILSEKQCRDQFKDMNKSCDALLFM
LNQKVKTLEVEIAKEKTICTKDKESVLLNKRVAEEQLVECVKTRELQHQERQLAKEQL
QKVQALCLPLDKDKFEMDLRNLWRDSIIPRSLDNLGYNLYHPLGSELASIRRACDHMP
SLMSSKVEELARSLRADIERVARENSDLQRQKLEAQQGLRASQEAKQKVEKEAQAREA
KLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAIRNSALDTCIKT
KSQPMMPVSRPMGPVPNPQPIDPASLEEFKRKILESQRPPAGIPVAPSSG"
BASE COUNT 612 a 733 c 636 g 366 t
ORIGIN
1 tgagcaggga cggtgcaccg gacggcggga tcgagcaaat gggtctggcc atggagcacg
61 gagggtccta cgctcgggcg gggggcagct ctcggggctg ctggtattac ctgcgctact
121 tcttcctctt cgtctccctc atccaattcc tcatcatcct ggggctcgtg ctcttcatgg
181 tctatggcaa cgtgcacgtg agcacagagt ccaacctgca ggccaccgag cgccgagccg
241 agggcctata cagtcagctc ctagggctca cggcctccca gtccaacttg accaaggagc
301 tcaacttcac cacccgcgcc aaggatgcca tcatgcagat gtggctgaat gctcgccgcg
361 acctggaccg catcaatgcc agcttccgcc agtgccaggg tgaccgggtc atctacacga
421 acaatcagag gtacatggct gccatcatct tgagtgagaa gcaatgcaga gatcaattca
481 aggacatgaa caagagctgc gatgccttgc tcttcatgct gaatcagaag gtgaagacgc
541 tggaggtgga gatagccaag gagaagacca tttgcactaa ggataaggaa agcgtgctgc
601 tgaacaaacg cgtggcggag gaacagctgg ttgaatgcgt gaaaacccgg gagctgcagc
661 accaagagcg ccagctggcc aaggagcaac tgcaaaaggt gcaagccctc tgcctgcccc
721 tggacaagga caagtttgag atggaccttc gtaacctgtg gagggactcc attatcccac
781 gcagcctgga caacctgggt tacaacctct accatcccct gggctcggaa ttggcctcca
841 tccgcagagc ctgcgaccac atgcccagcc tcatgagctc caaggtggag gagctggccc
901 ggagcctccg ggcggatatc gaacgcgtgg cccgcgagaa ctcagacctc caacgccaga
961 agctggaagc ccagcagggc ctgcgggcca gtcaggaggc gaaacagaag gtggagaagg
1021 aggctcaggc ccgggaggcc aagctccaag ctgaatgctc ccggcagacc cagctagcgc
1081 tggaggagaa ggcggtgctg cggaaggaac gagacaacct ggccaaggag ctggaagaga
1141 agaagaggga ggcggagcag ctcaggatgg agctggccat cagaaactca gccctggaca
1201 cctgcatcaa gaccaagtcg cagccgatga tgccagtgtc aaggcccatg ggccctgtcc
1261 ccaaccccca gcccatcgac ccagctagcc tggaggagtt caagaggaag atcctggagt
1321 cccagaggcc ccctgcaggc atccctgtag ccccatccag tggctgagga ggctccaggc
1381 ctgaggacca agggatggcc cgactcggcg gtttgcggag gatgcaggga tatgctcaca
1441 gcgcccgaca caaccccctc ccgccgcccc caaccaccca gggccaccat cagacaactc
1501 cctgcatgca aacccctagt accctctcac acccgcaccc gcgcctcacg atccctcacc
1561 cagagcacac ggccgcggag atgacgtcac gcaagcaacg gcgctgacgt cacatatcac
1621 cgtggtgatg gcgtcacgtg gccatgtaga cgtcacgaag agatatagcg atggcgtcgt
1681 gcagatgcag cacgtcgcac acagacatgg ggaacttggc atgacgtcac accgagatgc
1741 agcaacgacg tcacgggcca tgtcgacgtc acacatatta atgtcacaca gacgcggcga
1801 tggcatcaca cagacggtga tgatgtcaca cacagacaca gtgacaacac acaccatgac
1861 aacgacacct atagatatgg caccaacatc acatgcacgc atgccctttc acacacactt
1921 tctacccaat tctcacctag tgtcacgttc ccccgaccct ggcacacggg ccaaggtacc
1981 cacaggatcc catcccctcc cgcacagccc tgggccccag cacctcccct cctccagctt
2041 cctggcctcc cagccacttc ctcaccccca gtgcctggac ccggaggtga gaacaggaag
2101 ccattcacct ccgctccttg agcgtgagtg tttccaggac cccctcgggg ccctgagccg
2161 ggggtgaggg tcacctgttg tcgggagggg agccactcct tctcccccaa ctcccagccc
2221 tgcctgtggc ccgttgaaat gttggtggca cttaataaat attagtaaat ccttaaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaa
//