LOCUS BC056234 1569 bp mRNA linear HUM 20-DEC-2004
DEFINITION Homo sapiens 2-deoxyribose-5-phosphate aldolase homolog (C.
elegans), mRNA (cDNA clone IMAGE:4305840), partial cds.
ACCESSION BC056234
VERSION BC056234.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1569)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1569
/db_xref="H-InvDB:HIT000259526"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4305840"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1569
/gene="DERA"
/gene_synonym="CGI-26"
/gene_synonym="DEOC"
/db_xref="GeneID:51071"
CDS <1..1011
/gene="DERA"
/gene_synonym="CGI-26"
/gene_synonym="DEOC"
/codon_start=1
/product="DERA protein"
/protein_id="AAH56234.1"
/db_xref="GeneID:51071"
/translation="GGRRGGRLPAGSSGAARAMSAHNRGTELDLSWISKIQVNHPAVL
RRAEQIQARRTVKKEWQAAWLLKAVTFIDLTTLSGDDTSSNIQRLCYKAKYPIREDLL
KALNMHDKGITTAAVCVYPARVCDAVKALKAAGCNIPVASVAAGFPAGQTHLKTRLEE
IRLAVEDGATEIDVVINRSLVLTGQWEALYDEIRQFRKACGEAHLKTILATGELGTLT
NVYKASMIAMMAGSDFIKTSTGKETVNATFPVAIVMLRAIRDFFWKTGNKIGFKPAGG
IRSAKDSLAWLSLVKEELGDEWLKPELFRIGASTLLSDIERQIYHHVTGRYAAYHDLP
MS"
BASE COUNT 487 a 320 c 349 g 413 t
ORIGIN
1 ggggggcgca gaggcgggcg cctaccagcc ggcagctccg gagctgcccg cgccatgtcc
61 gcgcacaatc ggggcaccga gctcgacctt agctggatct ccaaaataca agtgaatcac
121 ccggcagttc tgaggcgtgc ggaacaaatc caggctcgca gaaccgtgaa aaaggagtgg
181 caggctgctt ggctcctgaa agctgttacc tttatagatc ttactacact ttcaggtgat
241 gatacatctt ccaacattca aaggctctgt tataaagcca aatacccaat ccgggaagat
301 ctcttaaaag ctttaaatat gcatgataaa ggcattacta cagccgccgt ttgtgtttat
361 cccgcccggg tgtgtgatgc tgtaaaagca ctcaaggctg caggctgtaa tatccctgtg
421 gcatcagtgg ccgctggatt tccagctgga cagactcatt tgaagacacg attagaagag
481 atcagattgg ctgtggaaga tggagctaca gaaatcgacg tggtaattaa cagaagcttg
541 gtgctgacag gccagtggga agccctgtat gatgagattc gtcagtttcg caaggcctgt
601 ggggaggctc atcttaaaac tatattagcg acaggagaac ttggaactct tactaatgtc
661 tataaagcca gtatgatagc aatgatggca ggatcagatt ttattaagac ctctactgga
721 aaagaaacag taaatgccac cttcccggta gctatagtaa tgctgcgggc cattagagat
781 ttcttctgga aaactggaaa caagataggg tttaaaccag caggaggcat ccgcagtgca
841 aaggattccc ttgcttggct ctctcttgta aaggaggagc ttggagatga gtggctgaag
901 ccagaactct ttcgaatagg tgccagtact ctgctctcgg acattgagag gcagatttac
961 catcatgtga ctggaagata tgcagcttat catgatcttc caatgtctta aatcagtcac
1021 cagttccaga aaagttcttt acgacaatgt ttaaaaatta tttttctacg taattgctaa
1081 aattatttaa ttaaaaaatt gggcagtagg taactggcat tcctctcttt aaaatttcta
1141 ccgaacttaa tggaatggaa aaagcaaact catccacatg tggtactcat ttcaggcaca
1201 tctgaaatga tcttaattac tagaagatct gcactattaa ctttgtgaag agtttctcct
1261 aaaaacttta agtaaaatgt taatggtagc tttgataaca tcaaattcta agggagaaaa
1321 aaacaatatt aaaccgccca agcagtgtgc cctagcagag gaaaatgcaa catctcgcaa
1381 gcgctgctgt aacgacttca ggagtcactg attcagcact aatttcctgc tgtgaaaact
1441 catctttcat ttttgccgtg gataggcgct tttattaatt gttgtcctaa tgaaatttct
1501 gacattgtca tatacaacga tgaatatcat taaaattttt gaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaa
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