LOCUS BC056151 2359 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens galactosamine (N-acetyl)-6-sulfate sulfatase, mRNA (cDNA clone MGC:64985 IMAGE:6026248), complete cds. ACCESSION BC056151 VERSION BC056151.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2359) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2359) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: k Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 61698137. FEATURES Location/Qualifiers source 1..2359 /db_xref="H-InvDB:HIT000054133" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:64985 IMAGE:6026248" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2359 /gene="GALNS" /gene_synonym="GALNAC6S" /gene_synonym="GAS" /gene_synonym="MPS4A" /db_xref="GeneID:2588" /db_xref="HGNC:HGNC:4122" /db_xref="MIM:253000" CDS 71..1639 /gene="GALNS" /gene_synonym="GALNAC6S" /gene_synonym="GAS" /gene_synonym="MPS4A" /codon_start=1 /product="galactosamine (N-acetyl)-6-sulfate sulfatase" /protein_id="AAH56151.1" /db_xref="GeneID:2588" /db_xref="HGNC:HGNC:4122" /db_xref="MIM:253000" /translation="MAAVVAATRWWQLLLVLSAAGMGASGAPQPPNILLLLMDDMGWG DLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRLPIRNGFYTTNA HARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRPQFHPLKHGFDEWF GSPNCHFGPYDNKARPNIPVYRDWEMVGRYYEEFPINLKTGEANLTQIYLQEALDFIK RQARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGDAVREIDDSIGKILELLQDLH VADNTFVFFTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTAGQ VSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYYRGDTLMA ATLGQHKAHFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGE RFPLSFASAEYQEALSRITSVVQQHQEALVPAQPQLNVCNWAVMNWAPPGCEKLGKCL TPPESIPKKCLWSH" BASE COUNT 501 a 731 c 662 g 465 t ORIGIN 1 agccggaagg gccggcggac gctcgctagg tcggctcgct ggccggggct ccgcggctcc 61 cgtggttgcc atggcggcgg ttgtcgcggc gacgaggtgg tggcagctgt tgctggtgct 121 cagcgccgcg gggatggggg cctcgggcgc cccgcagccc cccaacatcc tgctcctgct 181 catggacgac atgggatggg gtgacctcgg ggtgtatgga gagccctcca gagagacccc 241 gaatttggac cggatggctg cagaagggct gcttttccca aacttctatt ctgccaaccc 301 tctgtgctcg ccatcgaggg cggcactgct cacaggacgg ctacccatcc gcaatggctt 361 ctacaccacc aacgcccatg ccagaaacgc ctacacaccg caggagattg tgggcggcat 421 cccagactcg gagcagctcc tgccggagct tctgaagaag gccggctacg tcagcaagat 481 tgtcggcaag tggcatctgg gtcacaggcc ccagttccac cccctgaagc acggatttga 541 tgagtggttt ggatccccca actgccactt tggaccttat gacaacaagg ccaggcccaa 601 catccctgtg tacagggact gggagatggt tggcagatat tatgaagaat ttcctattaa 661 tctgaagacg ggggaagcca acctcaccca gatctacctg caggaagccc tggacttcat 721 taagagacag gcacggcacc accccttttt cctctactgg gctgtcgacg ccacgcacgc 781 acccgtctat gcctccaaac ccttcttggg caccagtcag cgagggcggt atggagacgc 841 cgtccgggag attgatgaca gcattgggaa gatactggag ctcctccaag acctgcacgt 901 cgcggacaac accttcgtct tcttcacgtc ggacaacggc gctgccctca tttccgcccc 961 cgaacaaggt ggcagcaacg gcccctttct gtgtgggaag cagaccacgt ttgaaggagg 1021 gatgagggag cctgccctcg catggtggcc agggcacgtc actgcaggcc aggtgagcca 1081 ccagctgggc agcatcatgg acctcttcac caccagcctg gcccttgcgg gcctgacgcc 1141 gcccagcgac agggccattg atggcctcaa cctcctcccc accctcctgc agggccggct 1201 gatggacagg cctatcttct attaccgtgg cgacacgctg atggcggcca ccctcgggca 1261 gcacaaggct cacttctgga cctggaccaa ctcctgggag aacttcagac agggcattga 1321 tttctgccct gggcagaacg tttcaggggt cacaactcac aatctggaag accacacgaa 1381 gctgcccctg atcttccacc tgggacggga cccaggggag aggttccccc tcagctttgc 1441 cagcgccgag taccaggagg ccctcagcag gatcacctcg gtcgtccagc agcaccagga 1501 ggccttggtc cccgcgcagc cccagctcaa cgtgtgcaac tgggcggtca tgaactgggc 1561 acctccgggc tgtgaaaagt tagggaagtg tctgacacct ccagaatcca ttcccaagaa 1621 gtgcctctgg tcccactagc acctgcgcag actcaggcca ggcctagaat ctccggttgg 1681 ccctgcaagt gcctggagga aggatggctc tggcctcggt cctcccccaa ccctgcccaa 1741 gccagacaga cagcacctgc agacgcaggg ggactgcaca attccacctg cccaggacct 1801 gaccctggcg tgtgcttggc cctcctcctc gcccacggcg cctcagattt caggaccctc 1861 ctcctcgccc acggcgcctc agacctcagg accctgccgt ctcacgcctt tgtgaacccc 1921 aaatatctga gaccagtctc agtttatttt gccaagggta aggatgcacc tgtgacagcc 1981 tcaggaggtc ctgacaacag gtgcctgagg tggctgggga tacagtttgc ctttatacat 2041 cttagggaga cacaagatca gtatgtgtat ggcgtacatt ggttcagtca gccttccact 2101 gaatacacga ttgagtctgg cccagtgaat ccgcattttt atgtaaacag taagggaacg 2161 gggcaatcat ataagcgttt gtctcagggg agccccagag ggatgacttc cagttccgtc 2221 tgtcctttgt ctacaaggaa tttccctgga cgctaattat gagggaggcg tgtagcttct 2281 tatcattgta actatgttat ttagaaataa aacgggaggc aggtttgcct aattcccagc 2341 ttgaaaaaaa aaaaaaaaa //