LOCUS BC056142 2793 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens nuclear factor (erythroid-derived 2)-like 3, mRNA
(cDNA clone IMAGE:4448235), partial cds.
ACCESSION BC056142
VERSION BC056142.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2793)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2793)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: b Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21918830.
FEATURES Location/Qualifiers
source 1..2793
/db_xref="H-InvDB:HIT000259513"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4448235"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2793
/gene="NFE2L3"
/gene_synonym="NRF3"
/db_xref="GeneID:9603"
/db_xref="MIM:604135"
CDS <1..1401
/gene="NFE2L3"
/gene_synonym="NRF3"
/codon_start=1
/product="NFE2L3 protein"
/protein_id="AAH56142.1"
/db_xref="GeneID:9603"
/db_xref="MIM:604135"
/translation="DENKIAEKPDWEAEKTTESRNERHLNGTDTSFSLEDLFQLLSSQ
PENSLEGISLGDIPLPGSISDGMNSSAHYHVNFSQAISQDVNLHEAILLCPNNTFRRD
PTARTSQSQEPFLQLNSHTTNPEQTLPGTNLTGFLSPVDNHMRNLTSQDLLYDLDINI
FDEINLMSLATEDNFDPIDVSQLFDEPDSDSGLSLDSSHNNTSVIKSNSSHSVCDEGA
IGYCTDHESSSHHDLEGAVGGYYPEPSKLCHLDQSDSDFHGDLTFQHVFHNHTYHLQP
TAPESTSEPFPWPGKSQKIRSRYLEDTDRNLSRDEQRAKALHIPFSVDEIVGMPVDSF
NSMLSRYYLTDLQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDVCNLQAKKETL
KREQAQCNKAINIMKQKLHDLYHDIFSRLRDDQGRPVNPNHYALQCTHDGSILIVPKE
LVASGHKKETQKGKRK"
misc_feature 1051..1233
/gene="NFE2L3"
/gene_synonym="NRF3"
/note="BRLZ; Region: basic region leucin zipper"
/db_xref="CDD:smart00338"
BASE COUNT 981 a 528 c 508 g 776 t
ORIGIN
1 gatgaaaaca aaatagcaga gaaacctgac tgggaggcag aaaagaccac tgaatctaga
61 aatgagagac atctgaatgg gacagatact tctttctctc tggaagactt attccagttg
121 ctttcatcac agcctgaaaa ttcactggag ggcatctcat tgggagatat tcctcttcca
181 ggcagtatca gtgatggcat gaattcttca gcacattatc atgtaaactt cagccaggct
241 ataagtcagg atgtgaatct tcatgaggcc atcttgcttt gtcccaacaa tacatttaga
301 agagatccaa cagcaaggac ttcacagtca caagaaccat ttctgcagtt aaattctcat
361 accaccaatc ctgagcaaac ccttcctgga actaatttga caggatttct ttcaccggtt
421 gacaatcata tgaggaatct aacaagccaa gacctactgt atgaccttga cataaatata
481 tttgatgaga taaacttaat gtcattggcc acagaagaca actttgatcc aatcgatgtt
541 tctcagcttt ttgatgaacc agattctgat tctggccttt ctttagattc aagtcacaat
601 aatacctctg tcatcaagtc taattcctct cactctgtgt gtgatgaagg tgctataggt
661 tattgcactg accatgaatc tagttcccat catgacttag aaggtgctgt aggtggctac
721 tacccagaac ccagtaagct ttgtcacttg gatcaaagtg attctgattt ccatggagat
781 cttacatttc aacacgtatt tcataaccac acttaccact tacagccaac tgcaccagaa
841 tctacttctg aaccttttcc gtggcctggg aagtcacaga agataaggag tagatacctt
901 gaagacacag atagaaactt gagccgtgat gaacagcgtg ctaaagcttt gcatatccct
961 ttttctgtag atgaaattgt cggcatgcct gttgattctt tcaatagcat gttaagtaga
1021 tattatctga cagacctaca agtctcactt atccgtgaca tcagacgaag agggaaaaat
1081 aaagttgctg cgcagaactg tcgtaaacgc aaattggaca taattttgaa tttagaagat
1141 gatgtatgta acttgcaagc aaagaaggaa actcttaaga gagagcaagc acaatgtaac
1201 aaagctatta acataatgaa acagaaactg catgaccttt atcatgatat ttttagtaga
1261 ttaagagatg accaaggtag gccagtcaat cccaaccact atgctctcca gtgtacccat
1321 gatggaagta tcttgatagt acccaaagaa ctggtggcct caggccacaa aaaggaaacc
1381 caaaagggaa agagaaagtg agaagaaact gaagatggac tctattatgt gaagtagtaa
1441 tgttcagaaa ctgattattt ggatcagaaa ccattgaaac tgcttcaaga attgtatctt
1501 taagtactgc tacttgaata actcagttaa cgctgttttg aagcttacat ggacaaatgt
1561 ttaggacttc aagatcacac ttgtgggcaa tctgggggag ccacaacttt tcatgaagtg
1621 cattgtatac aaaattcata gttatgtcca aagaataggt taacatgaaa acccagtaag
1681 actttccatc ttggcagcca tcctttttaa gagtaagttg gttacttcaa aaagagcaaa
1741 cactggggat caaattattt taagaggtat ttcagtttta aatgcaaaat agccttattt
1801 tcatttagtt tgttagcact atagtgagct tttcaaacac tattttaatc tttatattta
1861 acttataaat tttgctttct atggaaataa attttgtatt tgtattaaaa attaactttt
1921 cccttttata cagaatctga accaaattta ccttactttc cttccaaaat atccacattc
1981 aggaatatag gtgaataaca aataaggcag catagcaaac tgctcagact caagccaaat
2041 tgaggtcaac atagtatgcc aaatccatag taaggcaaat ccacccccct accccaatac
2101 ttaacacaca gaatactatg tgatatagaa tgcactgaag acctacggtc actggtagtt
2161 tgagccacag gccttcctca tgtaaccaga gacagaatgg gctacttgca aaaacgtaac
2221 tccttgtgtg tatattaaat ccataaaatc tctggcagta aagccagcct gaagggatgg
2281 cctcaccatc ttagaatact gagatctcac cagaacactg taagccatat aaacagtagg
2341 gaaagagtca gcaacagtga aaccatctgt ttaaaatggg caaaagcgat taagggaaaa
2401 aaaacaggtg aatttgaaaa taaaccaggg taaggtaaat tctagaaata atagcatttg
2461 aaatgaaaac ctcacttaag ttcactagaa cagtaaacag gagattgctg aattttttga
2521 agacagcaat gacctcacct agatgactca agtttgggga acatcaagat tttgacgggt
2581 actataatgc ttaatatgtc caaattttca aaatgaagtt tctcagatat tatttctgcc
2641 ataggagcta cagtgtagag tatcacataa gtatcttggg ctagagaaat gcagtttata
2701 tataccgttg gatttttata ataaagtttc ccaagacctg ttaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//