LOCUS BC055774 2293 bp mRNA linear HTC 19-NOV-2003
DEFINITION Mus musculus forkhead box G1, mRNA (cDNA clone IMAGE:6811138), with
apparent retained intron.
ACCESSION BC055774
VERSION BC055774.1
KEYWORDS HTC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2293)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2293)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Jim Lin, University of Iowa
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 125 Row: p Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2293
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/clone="IMAGE:6811138"
/tissue_type="Brain, mouse, 13.5, 14.5, 16.5, 17.5 dpc"
/clone_lib="NIH_BMAP_FW0"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
BASE COUNT 569 a 665 c 549 g 510 t
ORIGIN
1 cgagccacgg ccaccacaac agccaccacc cccagcatca ccatcatcat caccaccacc
61 accacccgcc gccgcccgcg ccccagccgc ctccaccgcc gccccagcag cagcagcagc
121 agccgccccc ggccccgcag cccccgcagg cgcgcggcgc cccagcagcc gacgacgaca
181 agggtcccca gccgctcctg ctcccgccct ccaccgccct ggacggggcc aaggctgacg
241 cacttggagc caaaggcgag ccgggcggcg ggccggcgga gctggcgccc gtcgggccgg
301 acgagaagga gaagggcgcg ggcgccgggg gggaggagaa gaaaggggcg ggcgagggcg
361 gcaaggacgg ggaggggggc aaggagggcg acaagaagaa cggcaagtac gagaagccgc
421 cgttcagcta caacgcgctc atcatgatgg ccatcaggca gagtcccgag aagcgcctga
481 cgctcaatgg catctatgag ttcatcatga agaacttccc ctactaccgc gagaacaagc
541 agggctggca gaactccatc cgccacaacc tgtccctcaa caagtgcttc gtgaaggtac
601 cgcgccacta cgacgacccg ggcaagggca actactggat gctcgacccg tcgagcgacg
661 acgtgttcat cggcggcacg accggcaagc tgcggcgccg ctccaccacg tctcgggcca
721 agctggcctt taagcgcggg gcgcgcctca cctccaccgg cctcaccttc atggaccgcg
781 ccggctccct ctactggccc atgtcgccct tcctgtccct gcaccacccc cgcgccagca
841 gcactttgag ttacaacggg accacgtcgg cctaccccag ccaccccatg ccctacagct
901 ccgtgttgac tcaaaactcg ctgggcaaca accactcctt ctccaccgcc aacgggctga
961 gtgtggaccg gctggtcaac ggggagatcc cgtacgccac gcaccacctc acggccgctg
1021 cgctcgccgc ctcggtgccc tgcggcctgt cggtgccctg ctccgggacc tactccctca
1081 acccctgctc cgtcaacctg ctcgcgggcc agaccagtta ctttttcccc cacgtcccgc
1141 acccgtcaat gacttcgcag accagcacgt ccatgagcgc ccgggccgcg tcctcctcta
1201 cgtcgccgca ggccccctcg accctgccct gtgagtcttt aagaccctct ttgccaagtt
1261 ttacgacagg actgtccggg ggactgtctg attatttcac acatcaaaat caggggtctt
1321 cttccaaccc tttaatacat taacatccgg gggaccagac tgtaagtgaa cgttttacac
1381 acatttgcat tgtaaatgat aattaaaaaa ataagtccag gtatttttta ttaagccccc
1441 cctccccatt tctgtacgtt tgttcagtct ttagggttgt ttactattct aacacggtgt
1501 ggagtgtcag cgaggtgcaa tgtgggagaa tacattgtag aatataaggt ttggacgtca
1561 aattatagta gaatgtgtat ctaaatagtg actgctttgc catttcattc aaacctgaca
1621 agtctatctc aacaggctgc cagatttcca tgtgtgcagt attataagtt atcatggagc
1681 tatctggtgg acgcaggcct tgagaacaac ctaaattatg aagagagttt taaaatgtta
1741 aattgtaatt tgtatttaag aatttgtagt aaaggtgccc aaggaattat attggccatt
1801 tattgttttg tcctttttct ttaaagaact gtttctttcc ttttgtttac ttttagacca
1861 aagattggat tctagcaaat gcacttggta tactaagtat taaaacaagt aaacaaacaa
1921 acgaaaaagg aaggttgttt agttggcaac actgcccatt caattgaatc cgaaggagac
1981 aaaattaagg attgccttca gtttgtgttg tgtatatttc gatgtatgtg gtcactaaca
2041 ggtcactttt attttttcta aatgtagtga aatgttaata cctattgtac ttataggtaa
2101 accttgcaaa tatgtaacct gtgttgcgca aatgccgcat caatttgagt gattgttaat
2161 gttgtcttaa aatttcttga ttgtgatact gtggtcatat gcccgtgttt gtcacttaca
2221 aaaatgttta ctatgaacac acagaaataa aaaataggct aaattcaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaa
//