LOCUS BC055287 3539 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens zinc finger protein 282, mRNA (cDNA clone
IMAGE:6188941), partial cds.
ACCESSION BC055287
VERSION BC055287.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3539)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3539)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: o Column: 2.
FEATURES Location/Qualifiers
source 1..3539
/db_xref="H-InvDB:HIT000259497"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6188941"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3539
/gene="ZNF282"
/gene_synonym="HUB1"
/db_xref="GeneID:8427"
/db_xref="MIM:603397"
CDS <1..1934
/gene="ZNF282"
/gene_synonym="HUB1"
/codon_start=3
/product="ZNF282 protein"
/protein_id="AAH55287.1"
/db_xref="GeneID:8427"
/db_xref="MIM:603397"
/translation="QALPPEEVCHQEPALRGEMAEGMPPMQAQEWDMDARRPMPFQFP
PFPDRAPVFPDRMMREPQLPTAEISLWTVVAAIQAVERKVDAQASQLLNLEGRTGTAE
KKLADCEKTAVEFGNHMESKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWVLRLPPG
SKGEAPKVPVTFVDIAVYFSEDEWKNLDEWQKELYNNLVKENYKTLMSLDAEGSVPKP
DAPVQAEPREEPCVWEQRHPEEREIPMDPEAGAEPLVPAQDASSQVKREDTLCVRGQR
GLEERAIPTESITDSPISAQDLLSRIKQEEHQCVWDQQDLADRDIPTDPNSESLISAH
DILSWIKQEEQPYPWGPRDSMDGELGLDSGPSDSLLMVKNPPPAPPQPQPQPQPPQPQ
LQSQPQPQSLPPIAVAENPGGPPSRGLLDDGFQVLPGERGSGEAPPGGDRSTGGGGGD
GGGGGGGAEAGTGAGGGCGSCCPGGLRRSLLLHGARSKPYSCPECGKSFGVRKSLIIH
HRSHTKERPYECAECEKSFNCHSGLIRHQMTHRGERPYKCSECEKTYSRKEHLQNHHR
LHTGERPFQCALCGKSFIRKQNLLKHQRIHTGERPYTCGECGKSFRYKESLKDHLRVH
SGGPGPGAPRQLPPPPERD"
misc_feature 510..698
/gene="ZNF282"
/gene_synonym="HUB1"
/note="KRAB; Region: krueppel associated box"
/db_xref="CDD:smart00349"
misc_feature 1434..1871
/gene="ZNF282"
/gene_synonym="HUB1"
/note="COG5048; Region: COG5048, FOG: Zn-finger [General
function prediction only]"
/db_xref="CDD:COG5048"
BASE COUNT 749 a 1101 c 1088 g 601 t
ORIGIN
1 cccaggctct gcccccggag gaggtctgcc accaggagcc ggcgctgcgc ggggaaatgg
61 ccgagggaat gccgcccatg caggctcaag aatgggacat ggacgcccgg cggccaatgc
121 cttttcagtt cccacccttt ccagataggg cacctgtctt ccccgaccgc atgatgcgag
181 agccccagtt gcccacagca gagatctcac tctggactgt ggtggctgcc attcaggctg
241 tggagaggaa ggtggatgcc caggccagcc agctgctgaa cctggagggg cgcacgggga
301 cagccgagaa gaagctggcc gactgtgaaa agacggccgt ggaatttggg aaccacatgg
361 agagcaagtg ggccgtgctg gggaccctgc tgcaggagta cgggctgctg cagaggcggc
421 tggagaactt ggagaacttg ctgcgcaaca ggaacttctg ggtcctgcgg ctgcccccgg
481 gcagcaaggg ggaggccccc aaggttccag tgacttttgt cgacattgct gtgtacttct
541 ccgaagacga gtggaagaac ttggacgaat ggcagaagga gctttataac aaccttgtta
601 aggagaacta caaaaccctc atgtccctgg acgcggaggg ctcagtcccc aagccagatg
661 ctccagtcca ggctgagccc agggaagaac cttgtgtgtg ggagcagcgc caccccgaag
721 agagagaaat cccaatggat cccgaagcag gagcagagcc cctggtgcct gcgcaggatg
781 cgtcctccca ggtgaagcgt gaggacaccc tgtgtgtccg gggtcagcgg ggcctggagg
841 aaagagccat ccctacggaa tccattaccg actccccaat ttctgcccag gacctcttgt
901 cccggattaa acaggaggag catcagtgcg tgtgggatca gcaggatttg gcagacagag
961 atattcccac ggatcccaat tcagagtctc tcatctcagc acatgacatt ttgtcatgga
1021 tcaagcagga ggagcagcca tacccatggg gaccacgcga ctcaatggac ggagagcttg
1081 gattagactc tggccctagt gacagcctgc tgatggtgaa gaacccaccc ccggccccgc
1141 cacagcccca gccccagccc cagccaccgc agccgcagct gcagtcgcag ccccagcccc
1201 agagcctgcc ccccatcgcg gtggccgaga acccgggcgg ccccccgagc cgagggctgc
1261 tggacgacgg tttccaggtg ctgcccgggg agcgtggctc cggcgaggcg ccgccgggtg
1321 gggaccgcag caccgggggc ggcgggggcg atgggggcgg tgggggcggc ggcgcggagg
1381 cggggacggg ggcaggcggc ggctgtggca gctgctgccc tggcgggctg cggcggagcc
1441 tcctcctgca cggcgcccgc agcaagccct actcgtgccc cgagtgcggc aagagcttcg
1501 gcgtgcgcaa gagcctcatc atccaccacc gcagccacac caaggagcgg ccctacgagt
1561 gcgctgagtg cgagaagagc ttcaactgcc actcgggcct catccgccac cagatgacgc
1621 accgcggcga gcggccctac aagtgctcgg agtgcgagaa gacctacagc cgtaaggagc
1681 acctgcagaa ccaccatcgg ctgcacacgg gcgagcggcc tttccaatgt gcactgtgcg
1741 gcaagagctt catccgcaag cagaacctgc tcaagcacca gcgcatccac acgggcgagc
1801 gcccctacac gtgcggcgag tgcggcaaga gcttccgcta caaggagtcg ctcaaggacc
1861 acctgcgcgt gcacagcggc ggcccgggcc ccggcgcccc acggcagctc ccgccgcctc
1921 ctgagcgaga ctagggctgg gctgggggag ggcagggccg gacggagtgg atcgggggcg
1981 gcctgagcac caaccacctt gccgggtgtc ctcagccacc gtctggaaat cggcaacagg
2041 cattgcactc cggttggggg tcccccaggg tggggcaggg atcccccaga tctgtctggt
2101 ctgaatggac gcccagctca tctagggtgg acccagctgc tggggaagag ccagggggac
2161 cgcgaggagc cgagcgtcct cgggcaccgc cctcacacct cctcgagtgc cctgggacca
2221 ctgggccaca gatggtcatc aggggaagcc accagggagt cccgaagccc ttctgagatc
2281 aggaaatcag gtcccaaggt taggagacgc cctgaaaaaa aaagcgaagg ccgagggatg
2341 tgctaagggt aacaccttca tgatgacaac actgcctcgc gtttcaatag cgctttatac
2401 ttttttaagt gttttctatc cgttatccat ttcacccttg gcctatccct ctcagatagg
2461 tggggtagga ttttcctggt gaccgagtaa agtgagaggc aggtgagacg gttcacccaa
2521 tcacacggga aggggcgcgc gctgcccaac cgcgctctcc gcctacctcc gctgctcggg
2581 aagctgctgg cctggccctc ctggtctctc ttcctttcct ggtctctctt cctttccttg
2641 ctctcaccca cggataaaac cagaagcgac aggaggccag ctcctggggt tcctgggagc
2701 cgggaacaga ttggctacgg aacgccccag gttgtacatt cagagggctc tttctccatg
2761 ggagctcctg gtgccgcctc ggccccagcc tgtccccagc ccctcaatct ggtgcagcag
2821 catcttgtca ctgcacaaca gtggcctggt cccccacagg cagttagggc cccaggtcag
2881 acctcaccat gatgatttgt tccagttctc ccagggcaga ggggcgaggg agaggctttt
2941 gctgtgagag tagccgtcac gtgtctcttc ccagcagcgc cgggcaagtg ggtgctagag
3001 tctgagcctc aggctctcct gccctgggcc tcccaattgg tgctatctgt tactgcccgt
3061 gctcacggac atggatacag accctgctgt gctccacacc ctgcaggcgc ctcgggaagc
3121 gcccaaagga ttccccttca cgttggtgca cctgctccat agctccgggc gctgcgtccc
3181 gaggggccac agtctccatt tcagcgtctt gcatggcctg gcaccgggtg gggtggtatg
3241 ccccaggacc cttgtttgtg tcaaaaatga ctttccctgc ccttgccgtg ggtccggcgt
3301 tcctcccagc cgggatcaca gtgggcagcc ggcacccggc accactttgg cgagcgtcct
3361 gcttccgccc tcgccctcat ctacgctgct ccgctttcct cagacccctt tttgccgtgc
3421 aaagggaatt cttgacatta aataaaaggt atccagattg caaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//