LOCUS BC055081 900 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:6708852), partial cds.
ACCESSION BC055081
VERSION BC055081.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..900
/db_xref="H-InvDB:HIT000259485"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6708852"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_128"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>900
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 274..>900
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAH55081.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MQGRITKVLNMKPPEILSMIEEAAGTRMYEYKRIAAQKTIEKKE
AKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKV
RSAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGILRSLEDALAE
AQRVNTKSQSAFDLKKKNLACEESKRKELEKNMVEDSKTLATKKKKKKK"
BASE COUNT 342 a 138 c 206 g 214 t
ORIGIN
1 gggcgcgccg aaattcaaag gaataaatag ttccggcgcg ggtgttgaga gcggtgtggc
61 aggtgttgta gccgctatgg tgaagttcgc tttgtagcgg ccccggctag agagttgttc
121 tgttccctgc ctttgtgacc cggaggagct tttggggtgg ttattggtgg tagaaataaa
181 tatttaatca atggagtcaa tgccaacaac accagagtac aggatctctt ctgttctgtt
241 ggccttaatg ttaacaaccc tcactttctc atcatgcagg gccgaattac aaaagtattg
301 aatatgaaac ctccagagat tttatccatg atagaagaag cagctggaac caggatgtat
361 gaatacaaaa gaatagctgc acagaaaact atagaaaaaa aggaggctaa gctgaaagaa
421 attaagacga tacttgaaga agagattact ccaaccattc aaaaattaaa agaggaaaga
481 tcgtcctact tggagtacca aaaagtaatg agagaaatag aacatttgag tcgtttatat
541 attgcttatc agtttttgct ggctgaagat accaaagtac gctcagctga ggaattaaaa
601 gaaatgcaag ataaagttat aaagcttcag gaagaattgt ctgagaatga taaaaaaata
661 aaagcactta atcatgaaat agaagaattg gaaaaaagaa aagataagga aactggaggt
721 atacttcgat ctttagaaga tgctcttgca gaggctcagc gagttaatac taaatctcaa
781 agcgcatttg atctcaagaa gaaaaatctg gcatgtgagg aaagcaaacg caaagagctg
841 gaaaaaaata tggttgagga ctcaaaaact ttagcaacaa aaaaaaaaaa aaaaaaaaaa
//