LOCUS BC054883 910 bp mRNA linear HUM 08-OCT-2003
DEFINITION Homo sapiens cDNA clone MGC:62026 IMAGE:6450688, complete cds.
ACCESSION BC054883
VERSION BC054883.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 910)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 910)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..910
/db_xref="H-InvDB:HIT000054100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:62026 IMAGE:6450688"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
CDS 45..749
/codon_start=1
/product="Unknown (protein for MGC:62026)"
/protein_id="AAH54883.1"
/translation="MAWTVLLLGLLSHCTDSVASYVLTQPPSVSVAPGKTARITCGAD
NIGAKSVHWYQQKTDQAPVLVVHDDNDRPSGIPERFSGSNSGNTATLSISRVEPGDEA
DYFCQVWDNSGGQLWMFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISD
FYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVT
HEGSTVEKTVAPTECS"
misc_feature 120..428
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 495..719
/note="IGc1; Region: Immunoglobulin C-Type"
/db_xref="CDD:smart00407"
BASE COUNT 228 a 275 c 240 g 167 t
ORIGIN
1 ggggagtctg ggcctaagga agcagcactg gtggtgcctc agccatggcc tggaccgttc
61 tcctcctcgg cctcctctct cactgcacag actctgtggc ctcctatgtg ttgactcagc
121 caccctcggt gtcagtggcc ccaggaaaga cggccaggat tacctgtggg gcagacaaca
181 ttggagctaa aagtgtgcac tggtatcaac agaagaccga ccaggcccct gttctggtcg
241 tccatgacga caacgaccgg ccctcaggga tccctgagcg gttctctggc tccaattctg
301 ggaacacggc caccctgagc atcagcaggg tcgagcccgg ggatgaggcc gactattttt
361 gtcaggtgtg ggataatagt ggtggtcagc tttggatgtt cggcggaggg accaagttga
421 ccgtcctacg tcagcccaag gctgccccct cggtcactct gttcccaccc tcctctgagg
481 agcttcaagc caacaaggcc acactggtgt gtctcataag tgacttctac ccgggagccg
541 tgacagtggc ctggaaggca gatagcagcc ccgtcaaggc gggagtggag accaccacac
601 cctccaaaca aagcaacaac aagtacgcgg ccagcagcta cctgagcctg acgcctgagc
661 agtggaagtc ccacaaaagc tacagctgcc aggtcacgca tgaagggagc accgtggaga
721 agacagtggc ccctacagaa tgttcatagg ttctcatccc tcacccccca ccacgggaga
781 ctagagctgc aggatcccag gggaggggtc tctcctccca ccccaaggca tcaagccctt
841 ctccctgcac tcaataaacc ctcaataaat attctcattg taaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa
//