LOCUS BC054538 5410 bp mRNA linear HTC 19-OCT-2006 DEFINITION Mus musculus cDNA clone IMAGE:5703013, containing frame-shift errors. ACCESSION BC054538 VERSION BC054538.1 KEYWORDS HTC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 5410) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5410) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUL-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 114 Row: f Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6680557 This clone has the following problem: frame shifted. FEATURES Location/Qualifiers source 1..5410 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="IMAGE:5703013" /tissue_type="Brain, enriched mouse brain 12.5dpc" /clone_lib="NIH_BMAP_FI0" /lab_host="DH10B" /note="Vector: pYX-ASC" BASE COUNT 1311 a 1593 c 1472 g 1034 t ORIGIN 1 ggcagtaaga agcatcagtt ccaggatcgg ggaccctccc cggtgccagt gcccatgcac 61 ggctatcccc agtgacgcct gagaggtgac tctgtcctct ctggggcaac tgcagctgct 121 gaactaccaa ccaactccac agaaatggcc ggggcctctg tgaaggtggc ggtgcgtgtc 181 cgccccttca actcccggga aatgagccga gactccaagt gcatcattca gatgtctgga 241 agcaccacca ctattgtcaa ccccaaacag cccaaggaga cacccaagag cttcagcttt 301 gattactcct actggtcaca tacctcgccg gaggacatca actatgcctc tcagaagcag 361 gtctacaggg acattgggga agagatgcta cagcatgcct ttgagggcta caatgtgtgc 421 atctttgcct atgggcagac gggggccggc aagtcctaca ccatgatggg gaaacaggag 481 aaggaccagc aaggcatcat tccacagctc tgcgaagacc tcttctctcg aatcaacgac 541 accaccaacg acaacatgtc ctactctgtg gaggtcagct acatggagat ttactgtgag 601 cgagtccgtg acctcctgaa ccccaagaac aaaggcaacc tgcgtgtgag ggagcaccct 661 ctgctggggc cttatgtgga ggacctctcc aagctggctg taacctccta caatgacatc 721 caggacctca tggactcagg gaacaaggcc aggactgtgg cggccacaaa catgaatgag 781 accagcagcc gttctcacgc agtcttcaac atcatcttta cccagaagcg ccatgatgca 841 gagaccaaca tcaccacaga gaaagtgagc aaaatcagcc tggtggacct ggcaggcagt 901 gaacgagccg actccacagg agccaagggc acgcgactca aggagggggc caacatcaac 961 aagtctttga ccaccctggg aaaggtcatc tctgctctgg ctgaaatgga ctctggaccc 1021 aacaagaaca agaaaaagaa gaagacagat ttcatccctt accgagactc cgtattgaca 1081 tggcttctcc gggaaaacct cggtggcaac tcaaggacag ccatggtggc agccctgagc 1141 cctgcggaca tcaactatga tgagaccctc agcacactga gatatgcaga tcgggccaaa 1201 caaatccgct gcaatgccat catcaatgaa gaccccaaca acaagctgat tagagaactg 1261 aaggatgagg tgaccaggct gagagacctg ctgtatgccc aaggtcttgg cgatatcact 1321 gacatgacca atgccctggt gggcatgagc ccctcatctt cactctcagc cctgtccagc 1381 cgtgcagcct ctgtgtccag tctccatgag cgcatcttgt ttgctccagg cagcgaggag 1441 gctattgaaa ggctgaagga aacagagaag atcattgctg aactcaatga gacctgggag 1501 gagaagctgc ggcggacaga agccatccgg atggagaggg aagccttgct ggctgagatg 1561 ggtgtggcca tgagggaaga tggtggtacc ttgggtgtgt tttctcccaa aaagactcct 1621 catcttgtca acctgaatga ggaccctttg atgtccgaat gcctccttta ctacatcaaa 1681 gatggcgtca ccagagtggg cagagaagat gcagagaggc ggcaagacat tgtcctgagt 1741 ggacacttca tcaaagagga gcactgcatc ttccggagtg actcccgagg aggcggagaa 1801 gctgtggtga ccctggagcc ctgtgaagga gcagacacat atgtcaacgg caagaaagtc 1861 actgagccca gcatcctacg gtcaggaaac cgcatcatca tgggaaaaag ccacgtgttc 1921 cggtttaacc accctgagca ggcccgtcag gagcgtgagc gaacaccttg tgcagagaca 1981 cctgctgagc cagtggactg ggcctttgcc cagcgggaac tgctggagaa gtaaggcatt 2041 gacatgaagc aggagatgga gcagaggctc caggagttgg aggaccagta ccggagggag 2101 cgggaggagg ccacatacct tctggagcag cagaggctgg actatgagag taagctggag 2161 gccctacaga aacagatgga ctccaggtac tacccagagg tgaacgagga ggaagaagag 2221 ccagaggatg aagtccaatg gacagaacga gaatgtgagc tggcattgtg ggccttccgg 2281 aagtggaagt ggtaccagtt tacttctctg cgggacctgc tgtggggcaa tgccatcttc 2341 ctgaaggagg ccaacgccat cagtgtggag ctaaagaaga aggtccagtt ccagtttgtc 2401 ctcctcacgg acaccctgta ctccccactg ccgccagacc tactgccccc agaagccgcc 2461 aaagaccgag agacacgacc cttccccagg accattgtgg cagtggaggt ccaggaccag 2521 aagaatgggg ccacccacta ctggacactg gagaaactca ggcaacgcct ggacctgatg 2581 cgggaaatgt acgacagggc tgcagaggtt ccctccagcg tcgttgagga ctgtgacaac 2641 gtggtgaccg gcggggaccc cttctatgac cgcttcccct ggttccgact ggtgggcagg 2701 gccttcgtat acctgagcaa cctgctgtac cctgtgcccc tggtgcaccg agtggcaatc 2761 gtcagcgaaa agggagaggt gaaaggcttc ctccgtgtgc ggtgcaggcc atctcagctg 2821 atgaagaggc tccggattat ggctcgggtg tccgtcagtc aggaactgct aaaatctcct 2881 ttgatgacca gcattttgaa aagttccaat ctgagtcctg ccctgtggtg gggatgtccc 2941 gctcaggaac ttcccaagag gagctgcgca ttgtagaagg ccagggtcag ggggctgatg 3001 ctgggccttc agctgatgaa gttaacaaca acacctgttc agctgtgcct cctgaaggcc 3061 tcatggatag cccagagaag gctgccctgg atgggcctct ggacacagcc ctggaccacc 3121 tccgtctagg cagtaccttc accttccggg tgacagtcct gcaggcgtcc agtatctctg 3181 ctgaatacgc tgacatcttc tgccagttca actttatcca ccgccacgat gaggccttct 3241 ccactgaacc cctgaagaac actggcagag gaccccctct tggcttctac catgtccaaa 3301 atattgcggt agaggtgacc aagtccttca tcgaatacat caagagccag cccattgtgt 3361 tcgaggtctt tgggcactac cagcagcacc cgttcccacc tctttgcaag gatgtcctca 3421 gccccctgag accctcacgt cgccacttcc ccagggtcat gccgttatcc aagccagtgc 3481 ccgccactaa gctcagcacg atgacacggc cttccccagg tccctgccat tgcaagtatg 3541 acctgctggt ctacttcgag atctgcgagc tggaagccaa tggcgattac atccctgctg 3601 tggtggacca ccgtggtggc atgccgtgca tggggacttt ccttctccat cagggcatcc 3661 agagacggat aactgtgaca ctgttacatg agacaggaag ccacatccgc tggaaggaag 3721 tgcgcgagct agttgtgggt cgcatccgaa acaccccaga aactgacgaa gctctgattg 3781 accccaacat cttgtccctc aacatcctct catcaggata cgtccatcca gcccaggatg 3841 accggacctt ctaccagttt gaagcagcct gggacagttc catgcataac tctctcctgc 3901 tgaatcgtgt caccccttac cgggagaaaa tctacatgac gctctctgcc tacattgaga 3961 tggagaactg tacccagcca gctgtcatca ccaaggactt ctgcatggtt ttctactctc 4021 gggacgccaa gctacccgcc tcacgctcca ttcgcaacct gtttggcagt ggcagcctgc 4081 gggccacaga aggcaaccgt gtgactggtg tgtatgagct cagcctttgc cacgtggccg 4141 acgcaggcag cccagggatg cagcgtcggc gccggcgggt gctggacaca tcagtagcct 4201 atgtccgggg tgaggagaac ctggctggct ggaggccccg aagtgacagc ctgatcctag 4261 atcaccagtg ggaactggag aaactgagcc tcttacagga ggtggaaaag accaggcact 4321 acctgctcct tcgggagaag ctggagacga cccagcgccc tggccctgag gtgctgtccc 4381 cagcctccag tgaggactct gagtcccgta gttcttcagg tgcctcttcc ccattgtcag 4441 ccgagggtca gccgtcacct ctggaggctc ccaacgagag gcagagggag ctggctgtca 4501 agtgcttacg actcctcatg cacacattca acagggaata cacccacagc cacgtctgta 4561 tcagcgccag cgagagcaag ctctctgaga tgtctgtcac cctgatgcgg gacccatcca 4621 tgtcccctct gggtgctgct acactcactc cctcctccac ttgcccctct ctgatcgaag 4681 gacgatacgg tgccactgac gtgaggaccc cccagccctg ctcccggccc gccagcccag 4741 agcccgagct cctgccagaa cttgactcta agaagactcc ctcccctgtt cgggcaacag 4801 agacagagaa ggagccccag cgactgctgg tccctgacat ccaagagatc cgagtcagcc 4861 caatcgtctc caagaaggga tacctgcatt tcctggagcc acacacggct ggctgggcca 4921 agcgctttgt ggtggtgagg cgtccctacg cctacatgta caacagtgac aaggacacgg 4981 tggagagatt tgtgctcaac ctctccactg cgcaggtgga gtacagcgag gaccagcagg 5041 ccatgctcaa gacacccaac acattcgctg tgtgcacgga gcaccgaggc atcctgctgc 5101 aggccaacag tgacaaggac atgcacgact ggctgtatgc cttcaacccg ctcctggctg 5161 ggaccatccg gtccaagctc tctcgaagga gatctgcgca gatgcgggtc tgagttgaaa 5221 gccttccgga cttccagtgg cccagaccac tcccctgtcc ttaccatctg ttctgtcatc 5281 tgccactcag cccttccccc ctacccacca ccaggggaca cctgtgctgg gcccagcaac 5341 cctacctctg gagggaggcc tataccacat gacgaattgt gctcccccca aaaaaaaaaa 5401 aaaaaaaaaa //