LOCUS BC054436 1718 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus thymus cell antigen 1, theta, mRNA (cDNA clone
MGC:62652 IMAGE:6312210), complete cds.
ACCESSION BC054436
VERSION BC054436.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Susan L. Sullivan, PhD.
cDNA Library Preparation: ResGen, Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 116 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254608.
FEATURES Location/Qualifiers
source 1..1718
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:62652 IMAGE:6312210"
/tissue_type="Olfactory epithelium, neonatal mouse,
C57Bl/6"
/clone_lib="NIH_MGC_129"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1718
/gene="Thy1"
/gene_synonym="CD90"
/gene_synonym="Thy-1.2"
/gene_synonym="Thy1.1"
/gene_synonym="Thy1.2"
/db_xref="GeneID:21838"
/db_xref="MGI:MGI:98747"
CDS 30..518
/gene="Thy1"
/gene_synonym="CD90"
/gene_synonym="Thy-1.2"
/gene_synonym="Thy1.1"
/gene_synonym="Thy1.2"
/codon_start=1
/product="thymus cell antigen 1, theta"
/protein_id="AAH54436.1"
/db_xref="GeneID:21838"
/db_xref="MGI:MGI:98747"
/translation="MNPAISVALLLSVLQVSRGQKVTSLTACLVNQNLRLDCRHENNT
KDNSIQHEFSLTREKRKHVLSGTLGIPEHTYRSRVTLSNQPYIKVLTLANFTTKDEGD
YFCELQVSGANPMSSNKSISVYRDKLVKCGGISLLVQNTSWMLLLLLSLSLLQALDFI
SL"
BASE COUNT 449 a 494 c 416 g 359 t
ORIGIN
1 ccagaatcca agtcggaact cttggcacca tgaacccagc catcagcgtc gctctcctgc
61 tctcagtctt gcaggtgtcc cgagggcaga aggtgaccag cctgacagcc tgcctggtga
121 accaaaacct tcgcctggac tgccgccatg agaataacac caaggataac tccatccagc
181 atgagttcag cctgacccga gagaagagga agcacgtgct ctcaggcacc cttgggatac
241 ccgagcacac gtaccgctcc cgcgtcaccc tctccaacca gccctatatc aaggtcctta
301 ccctagccaa cttcaccacc aaggatgagg gcgactactt ttgtgagctt caagtctcgg
361 gcgcgaatcc catgagctcc aataaaagta tcagtgtgta tagagacaag ctggtcaagt
421 gtggcggcat aagcctgctg gttcagaaca catcctggat gctgctgctg ctgctttccc
481 tctccctcct ccaagccctg gacttcattt ctctgtgact ggttgggccc aaggagaaac
541 aggagccctc gaggtccttc ctctgcagag gtcttgcttc tcccggtcag ctgactccct
601 ccccaagtcc ttcaaatatc tcagaacatg gggagaaacg gggaccttgt ccctcctaag
661 gaaccccagt gctgcatgcc atcatccccc ccaccctcgc ccccaccccc gccacttctc
721 cctccatgca taccactagc tgtcattttg tactctgtat ttattccagg gctgcttctg
781 attatttagt ttgttctttc cctggagacc tgttagaaca taagggcgta tggtgggtag
841 gggaggcagg atatcagtcc ctggggcgag ttcctccctg ccaaccaagc cagatgcctg
901 aaagagatat ggatgaggga agttggactg tgcctgtacc tggtacagtc atactctgtt
961 gaaagaatca tcggggaggg gggggggggc tcaagatggg agagctctgc tgagcctttg
1021 tggaccatcc aatgaggatg agggcttaga ttctaccagg tcattctcag ccaccacaca
1081 caagcgctct gccatcactg aagaagcccc ctagggctct tgggccaggg cacactcagt
1141 aaagatgcag gttcagtcag ggaatgatgg ggaaaggggt aggaggtggg ggagggatca
1201 ccccctcctc taaaacacga gcctgctgtc tccaaaggcc tctgcctgta gtgagggtgg
1261 cagaagaaga caaggagcca gaactctgac tccaggatct aagtccgtgc aggaagggga
1321 tcctagaacc atccggttgg acccagctta ccaagggaga gcctttattc ttctttccct
1381 tgcccctctg tgccagcccc tcttgctgtc cctgatcccc cagacagcga gagtcttgca
1441 acctgcctct tccaagacct cctaatctca ggggcaggcg gtggagtgag atccggcgtg
1501 cacacttttt ggaagatagc tttcccaagg atcctctccc ccactggcag ctctgcctgt
1561 cccatcacca tgtataatac caccactgct acagcatctc accgaggaaa gaaaactgca
1621 caataaaacc aagcctctgg agtgtgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaag
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