LOCUS BC054049 1101 bp mRNA linear HUM 19-JAN-2018
DEFINITION Homo sapiens ring finger protein 115, mRNA (cDNA clone MGC:65162
IMAGE:6157275), complete cds.
ACCESSION BC054049
VERSION BC054049.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jan 19, 2018 this sequence version replaced BC054049.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: m Column: 16.
FEATURES Location/Qualifiers
source 1..1101
/db_xref="H-InvDB:HIT000054059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65162 IMAGE:6157275"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1101
/gene="RNF115"
/gene_synonym="BCA2"
/db_xref="GeneID:27246"
/db_xref="HGNC:HGNC:18154"
CDS 59..973
/gene="RNF115"
/gene_synonym="BCA2"
/codon_start=1
/product="ring finger protein 115"
/protein_id="AAH54049.1"
/db_xref="GeneID:27246"
/db_xref="HGNC:HGNC:18154"
/translation="MAEASAAGADSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESG
FIEEVTDDSSFLGGGGSRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPLDQDNRA
NERGHQTHTDFWGARPPRLPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPG
SPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVT
QEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED
STRQSQSTEASASNRFSNDSQLHDRWTF"
BASE COUNT 312 a 259 c 277 g 253 t
ORIGIN
1 gcggcctggc gagggacggg ccggctgccc tctcggacgg ccgcggcgga gggcaaaaat
61 ggcggaggct tcggcggccg gggcggactc gggcgccgct gtagccgccc accggttttt
121 ctgccacttt tgcaagggcg aggtcagccc caaactaccg gaatatatat gtcccagatg
181 tgaatcaggc tttattgaag aagtgacaga tgattccagt tttttaggtg gtggcggcag
241 tcggatagac aataccacaa caacacattt tgcagagctt tggggccatt tggatcacac
301 gatgtttttt caagatttta gaccctttct aagtagcagt ccactggacc aagataatag
361 agccaatgaa aggggtcacc agactcacac tgacttctgg ggagcaagac ctccacggtt
421 gccattgggt cggagataca gatctcgagg aagttctcgt cctgacagat ctccagctat
481 tgaaggaata ctacaacaca tctttgcagg attctttgca aattctgcca ttcctggatc
541 tccacaccct ttttcctgga gcgggatgct gcactccaac cctggggact atgcctgggg
601 tcagacaggg cttgatgcca ttgtaaccca gcttttagga caactggaaa acacaggccc
661 tcccccagct gacaaggaaa agatcacatc tcttccaaca gtgacagtaa ctcaggaaca
721 agttgatatg ggtttagagt gtccagtatg caaagaagat tacacagttg aagaggaagt
781 ccggcagtta ccttgcaatc acttctttca cagcagttgt attgtgccgt ggctagaact
841 gcatgacaca tgtcctgtat gtaggaagag cttaaatggt gaggactcta ctcggcaaag
901 ccagagcact gaggcctctg caagcaacag atttagcaat gacagtcagc tacatgaccg
961 atggactttc tgaagctaaa gaccacacct gaatcagggc tgtggtaatc atcttaccat
1021 agctgtaaat tgtatcaaaa caaaaaatta gtagatggat ttaggaatat gtaagaaact
1081 caacacaaaa aaaaaaaaaa a
//