LOCUS BC054037 1432 bp mRNA linear HTC 23-JUL-2007
DEFINITION Homo sapiens Smith-Magenis syndrome chromosome region, candidate
7-like, mRNA (cDNA clone IMAGE:6527939), with apparent retained
intron.
ACCESSION BC054037
VERSION BC054037.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: p Column: 4
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1432
/db_xref="H-InvDB:HIT000259410"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6527939"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 391 a 305 c 312 g 424 t
ORIGIN
1 aagaagagct taaaaaagat aagattttaa agagtcccaa gttatttaag ttgagtgtaa
61 ttgtcattta aggaaggcaa atgagtttat catccttctt aaagagcatc tcttttaact
121 gttggacaaa accataactt tgtcatttta caaggaagaa cctcttaaga agtcctcaga
181 accagaagca atgtgaactc tcagcgctgg tcctggtggg tttgctgacc atgactgggc
241 aagccgttct ttttgctgcc atcttcctca tcataaagtg tggaacatag gcaattgctt
301 tgagattctt ggatagaaga ggacaacatt ctgcacctgc cccctttttt aaatctttgg
361 ggaaagatga gtaactttcc ccactactct gccttcctgt tcagtaactc ttacttttgc
421 ctgaagtaac agcatcttct acttctccat ctagagattt ttgtgtgtgt gccatcaagg
481 ttagcaaact ttatacgtag cctaacactt aaaaaatgca ctcattatct taaacctaat
541 aaattccaga gtttattttg gttctcctct gttgcccttc ctaaaaaatg agctgaagat
601 gacagtattt ttctttacat gcttggttat gacttttaaa gttttattta aataaatgtt
661 gaagctcaag tttaaagaag cgttgcagag gcccacggtc tcctgggtcc cggccacctg
721 tccatattcc acatttgctg actgtgctcc ctgcactcca ctcaagttga gagttcaaat
781 agtcttgaag gggaatcagc ttcaggatgg aaggacccag gagaggcccc gaggtgggag
841 ggttctgtaa atacagacta ctgcgagtgt ccagagctct ctgccatgat acttccttgg
901 gactgacttg gctgagaacg tgttctgtca gaggatttgt tagaactctg cccttttgtc
961 tgaaactcaa ggccaaggag aatgatagga gacttaggac agagctgacc cttgcaccag
1021 gctgggaggc tgcagccctt ttagatgcca cttactgtaa gtggccagaa taccagagag
1081 gtgggttcca tggtcaaatg cacagtaggt gtttaccttt acatttggat caccttgtag
1141 tctttaaatt cttggtccct gaggccaagt ccacaacttg ccttctagtc acttgcctgc
1201 ccgcagtggt ggtggatgtg ttagctggta gatttggaat cagtcaccag tctttctgta
1261 ctgtcttggt tagctctata taagtagggg cagcttagcc ctgaggccca gagacctgct
1321 gtcctttttc tccttgaggg aggaaataaa actgcggaat acaatgtcct tccatagcat
1381 gggaagaaga aaataaacat ctcctttcca acagcaaaaa aaaaaaaaaa aa
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