LOCUS BC053999 1720 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens necdin-like 2, mRNA (cDNA clone MGC:61635
IMAGE:5755143), complete cds.
ACCESSION BC053999
VERSION BC053999.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1720)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1720)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29826297.
FEATURES Location/Qualifiers
source 1..1720
/db_xref="H-InvDB:HIT000054039"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61635 IMAGE:5755143"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1720
/gene="NDNL2"
/gene_synonym="HCA4"
/gene_synonym="MAGEG1"
/gene_synonym="MAGEL3"
/db_xref="GeneID:56160"
/db_xref="HGNC:HGNC:7677"
/db_xref="MIM:608243"
CDS 84..998
/gene="NDNL2"
/gene_synonym="HCA4"
/gene_synonym="MAGEG1"
/gene_synonym="MAGEL3"
/codon_start=1
/product="necdin-like 2"
/protein_id="AAH53999.1"
/db_xref="GeneID:56160"
/db_xref="HGNC:HGNC:7677"
/db_xref="MIM:608243"
/translation="MLQKPRNRGRSGGQAERDRDWSHSGNPGASRAGEDARVLRDGFA
EEAPSTSRGPGGSQGSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQFLLIKDQK
KIPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEP
VEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGD
PKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPK
DWPAQYCEALADEENRARPQPSGPAPSS"
BASE COUNT 509 a 399 c 423 g 389 t
ORIGIN
1 cggcgttagc gggtcgccga cccgcaatcc ccgccgcggc tgcttgccta ccggagtgtg
61 cgccggcacc tgccgccgga gacatgttgc aaaaaccgag gaaccggggc cgctctggcg
121 gccaggccga gagggacaga gactggagcc atagcggaaa ccccggggct tcgcgggccg
181 gggaagacgc ccgggttctc agagacggct ttgccgagga ggccccgagc acgtcccgcg
241 ggccgggcgg ctcgcagggg tcgcagggcc cctcgcctca gggcgcccgc cgggcccagg
301 ccgcccccgc cgtggggccc aggagccaga agcagctgga gctgaaagtg tccgagctgg
361 tgcagttctt gctgattaaa gaccagaaga agattccgat caagcgggcc gacatactga
421 agcacgtcat cggggactac aaggacatct tccccgacct cttcaaacgg gccgccgagc
481 gcctccagta cgtcttcggg tataagctgg tggaacttga acccaagagc aacacttaca
541 tcctcatcaa caccctggag cctgtggagg aggatgccga gatgaggggt gaccaaggca
601 cgcccactac gggcctcctg atgatcgtct tagggctcat ctttatgaag ggcaacacca
661 tcaaggaaac tgaagcctgg gactttctgc ggcgcttagg ggtctacccc accaagaagc
721 atttaatttt cggagatcca aagaaactca ttactgagga ctttgtgcga cagcgttacc
781 tggaataccg gcggataccc cacaccgacc ccgtcgacta cgaattccag tggggcccgc
841 gaaccaacct ggaaaccagc aagatgaaag ttcttaagtt tgtggccaag gtccataatc
901 aagaccccaa ggactggcca gcgcagtact gtgaggcttt ggcagatgag gagaacaggg
961 ccagacctca gcctagtggc ccagctccat cctcttgaaa ggtggattca gagggacccc
1021 cgggacaagg gtctgagacc caaaggcaca gtttagagga ttgggggaag ggagaacgaa
1081 cccagggagc atattgctgt aaacgcttca atgtgtgtag ctttaggatg tgtttgcaaa
1141 gttttgtttt tttaatgttg tgttattttg ctccagattt tcatctataa acaaaggagc
1201 atttgttttg attttactct ttttggtata aaaaattttg ctagcttagt aaaacgaatt
1261 ggaaaacttg actatgatct ggaacagata atgcaagaag gaacacataa gtaagttgct
1321 ttggtgccaa gaaaataaaa aagctattat caggtctcct aactacccca gtttgtaagg
1381 aaaaataaaa gtttttataa aattaaaaaa aataattgcc tatatcctta ttatgttaac
1441 ctattttatt tttctatatt tcgtacatat ataagtatta ttcatggttc caagcaatga
1501 gtgtaatgta ttttctccca atagtaattg tttatattca taattattca gctctgctgc
1561 taaacacgta gttccacttc gtttttttct tcttgctact gtagttatta caataaatac
1621 tgtatttttg aagcacttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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