LOCUS BC053983 1887 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens matrix-remodelling associated 7, mRNA (cDNA clone
MGC:59883 IMAGE:5470630), complete cds.
ACCESSION BC053983
VERSION BC053983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1887)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1887)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56549128.
FEATURES Location/Qualifiers
source 1..1887
/db_xref="H-InvDB:HIT000259390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59883 IMAGE:5470630"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1887
/gene="MXRA7"
/gene_synonym="FLJ46603"
/gene_synonym="PS1TP1"
/gene_synonym="TMAP1"
/db_xref="GeneID:439921"
/db_xref="HGNC:HGNC:7541"
CDS 60..572
/gene="MXRA7"
/gene_synonym="FLJ46603"
/gene_synonym="PS1TP1"
/gene_synonym="TMAP1"
/codon_start=1
/product="matrix-remodelling associated 7"
/protein_id="AAH53983.1"
/db_xref="GeneID:439921"
/db_xref="HGNC:HGNC:7541"
/translation="MEAPAELLAALPALATALALLLAWLLVRRGAAASPEPARAPPEP
APPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGEPEGPGDPAAAP
AEAEEQAVEARQEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGKLRGNQYKKMMTKE
ELEEEQRTEE"
BASE COUNT 442 a 501 c 514 g 430 t
ORIGIN
1 cggggcgcgg cgggctccct cggggtccca gctggccggc actcggcggc cgcggcgcga
61 tggaggcgcc ggccgagcta ctggccgcgc tgcctgcgct ggccaccgcg ctggcccttc
121 tgctcgcctg gctactggtg cggcgtgggg cggccgcgag cccggagcct gcccgcgcgc
181 ccccggaacc cgcgcccccg gccgaggcca ccggggcccc ggcgccgtcc cgcccctgcg
241 cccccgagcc ggcggcctcg cccgcggggc cggaggagcc tggagagccc gcggggctgg
301 gggagctcgg ggagcctgcg ggaccggggg agcccgaagg gccaggggat cccgcggcgg
361 cgccagcgga ggcggaggag caggcggtgg aggcgaggca ggaagaggag caggacttgg
421 atggtgagaa ggggccatca tcggaagggc ctgaggagga ggacggagaa ggcttctcct
481 tcaaatacag ccccgggaag ctgaggggaa accagtacaa gaagatgatg accaaagagg
541 agctggagga ggagcagaga actgaagaat aacgaagtta tccttagcgt cctcctaaag
601 gcttttcctt ttggcatctt aaaagcttga gagataaaac ggaaacccca gagaggagtc
661 tgggcaggct cccagggtgc atgctgcctc cataaatctg ctgagctcta gaccctcaat
721 caggacttgt cccttggcta gcaggatcct gggaacacct ttggccctgc cctgtgtaga
781 gatgttcatg tctgttcctg tgggtcactt tgttaagctg aagagtttta agaggtagag
841 ctcagaccct ggactgggat ttttcttacc actcaaactt gctatccaca caccctgcac
901 accttagata aaaagaacat tttaaaagca gagttcactt tcactccagt ctcccctctt
961 ttgccctcac tgaagccaaa ccacagaaga ctttgaggaa tgagagacaa atgaggtaga
1021 gctcacctgt gctcaccagc tccgtcaggg tggtcagccg acccctttcc ctgggaaccc
1081 cacttctctc tgtggctggc ttggttgtcg ggggtgagat gccatattga ttacagggca
1141 gcaaagaacc agtaccagga atttacttga ccattcccct tatttttcat ctagaggaat
1201 ctcggattca gccctttcat tgctaagaca ccttttcact gaggttctta ccagctcagc
1261 caaatctcca ctctgctata gcagaagcaa taatgtttgc tttaaaaaga tttcttgacc
1321 tatgcctttt cttagaaagt ttgatagatt agttagaact tcagatcatc agatcagtct
1381 caaatgggtt tcttggaatt ttatatttga caatatttat actataccaa actcatttgc
1441 agttcttagg tttgttggtt aaaacatttt tttaaagcag taagtttata gaaaatgttt
1501 tcatttaatg gaaggctggg gaatgtccag catcaacccc tatggcatgc attcccagtg
1561 gccttctcat ctgggcctgg aacctttggt tcagggctta ggggagaaca ggccacatgg
1621 caacagccac acagtcattg ccttcaacac agagccacgt gtccccaaac agcaatagtc
1681 atgcccttgt ccaggctggg atctaattga tacaataggt cgttgactcc ctcctagtag
1741 agctatctag gtttgtctgg aaagtttccg accctggctt ataggcacca cacctcatgt
1801 actcctcatg gcttggatct ctgtattcag cctttgttca gtccaataaa ctttgagtag
1861 atgatctcaa aaaaaaaaaa aaaaaaa
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