LOCUS BC053901 2201 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens zinc finger protein 280A, mRNA (cDNA clone MGC:61573
IMAGE:6166804), complete cds.
ACCESSION BC053901
VERSION BC053901.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45269155.
FEATURES Location/Qualifiers
source 1..2201
/db_xref="H-InvDB:HIT000054021"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61573 IMAGE:6166804"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2201
/gene="ZNF280A"
/gene_synonym="3'OY11.1"
/gene_synonym="ZNF636"
/db_xref="GeneID:129025"
/db_xref="HGNC:HGNC:18597"
CDS 239..1867
/gene="ZNF280A"
/gene_synonym="3'OY11.1"
/gene_synonym="ZNF636"
/codon_start=1
/product="zinc finger protein 280A"
/protein_id="AAH53901.1"
/db_xref="GeneID:129025"
/db_xref="HGNC:HGNC:18597"
/translation="MGDIFLCKKVESPKKNLRESKQREEDDEDPDLIYVGVEHVHRDA
EVLFVGMISNSKPVVSNILNRVTPGSNSRRKKGHFRQYPAHVSQPANHVTSMAKAIMP
VSLSEGRSTDSPVTMKSSSEPGYKMSSPQVVSPSSSDSLPPGTQCLVGAMVSGGGRNE
SSPDSKRLSTSDINSRDSKRVKLRDGIPGVPSLAVVPSDMSSTISTNTPSQGICNSSN
HVQNGVTFPWPDANGKAHFNLTDPERASESALAMTDISSLASQNKTFDPKKENPIVLL
SDFYYGQHKGDGQPEQKTHTTFKCLSCVKVLKNIKFMNHMKHHLEFEKQRNDSWEDHT
TCQHCHRQFPTPFQLQCHIDSVHIAMGPSAVCKICELSFETDQVLLQHMKDHHKPGEM
PYVCQVCHYRSSVFADVETHFRTCHENTKNLLCLFCLKLFKTAIPYMNHCWRHSRRRV
LQCSKCRLQFLTLKEEIEHKTKDHQTFKKPEQLQGLPSETKVIIQTSVQPGSSGMASV
IVSNTDPQSSPVKTKKKTAMNTRDSRLPCSKDSS"
BASE COUNT 706 a 477 c 477 g 541 t
ORIGIN
1 gagcaagcgg cgttgttcgc ctgcggaagc agtgctgccg gtctctggac aaatttctcc
61 gggaggtgga gacaaggaag ctccagcttc gctttccctt gtggcccaga gtggaacata
121 ctgagctgca ctgaatcatc tggatgcact cgcaacttta ggaactggtg gcaatttgta
181 aaaagacagc tctggaagtt gaagagacca gtggcttcaa gcaaaaagta aattgaaaat
241 gggagatatc tttttgtgta agaaagtgga atcaccaaag aagaatttga gagaatccaa
301 acaaagggag gaggatgatg aagatccaga tctgatctat gttggggtgg agcatgtaca
361 tagagatgct gaagttctct ttgtcgggat gatttcaaat tcaaaaccag tcgtttcaaa
421 cattttgaac agagtcaccc caggctcaaa ttcaagaaga aagaaaggcc acttccgtca
481 atatcctgct cacgtgtcgc agcctgcaaa tcatgtgacc tctatggcaa aagccatcat
541 gccggtttct ctgtctgagg ggcgatcgac agatagtcct gtcactatga agtcttcatc
601 tgaacctggt tataaaatga gctcaccaca agttgtttct cccagttcct cagactcgct
661 ccccccaggg actcagtgtc tagttggagc tatggtctct ggaggaggca gaaatgagag
721 ttctcctgat tcaaagcgac tttccacttc agatataaac agcagagatt ccaaaagggt
781 taaactcagg gatggaatcc caggggtacc ttctttagct gtggtccctt cagatatgtc
841 ttctacaata agcacaaata caccctcaca ggggatctgc aactcatcaa accatgttca
901 gaatggagta acatttcctt ggcctgatgc taatggaaag gcacatttca atcttacaga
961 tccagagaga gcaagtgagt ctgccctggc aatgacagac atttcaagtc tagcaagtca
1021 aaacaagacc tttgatccca agaaagaaaa tcccatcgtg ttacttagcg acttttacta
1081 tggacagcat aaaggagatg ggcagccgga acagaagact cacaccacct ttaaatgcct
1141 cagctgcgtg aaagttctaa aaaatattaa gtttatgaat cacatgaagc atcatttgga
1201 atttgagaag cagaggaacg acagctggga agaccacacc acctgccagc actgccaccg
1261 gcagtttccc actcccttcc agctacagtg tcacattgat agtgtacaca tcgccatggg
1321 gccctctgct gtctgtaaaa tctgtgaatt gtcatttgaa acagatcagg tcctcttaca
1381 acacatgaag gaccatcata agcctggcga aatgccttat gtgtgccagg tttgccatta
1441 cagatcgtcg gtctttgctg atgtggaaac acattttaga acgtgccatg aaaacacaaa
1501 gaatttgctt tgtctgtttt gtctcaaact tttcaaaact gcaataccat acatgaatca
1561 ttgttggagg cacagcagaa ggagggtcct tcagtgttcc aagtgccggc tacagttttt
1621 gacgttgaag gaggaaatag agcacaaaac caaggaccat caaacattta aaaagccgga
1681 gcaactgcaa gggttgccta gtgaaacaaa agttattatt caaacttcag ttcagccagg
1741 atcaagtggt atggcttccg ttattgttag caacactgac cctcagtctt ctcctgtaaa
1801 aactaaaaag aagacggcta tgaacactag agattccaga ctcccttgca gcaaggattc
1861 tagctgaaaa tatgttcgac tgacttccag gagttccgaa aggcagaagt gaggctaggc
1921 catatgtgca ttgtggctgt agatgctagc aagcaatgtc atcaactgtc aggttgtttt
1981 tttacagtga catctcatca gctccctatt gtcaagaagt agctccaaag tctttgagcc
2041 ctttcccagt caaatgctcc caacagggca tcccttattc tgacctcaga ggtttttctt
2101 gttcatgaac tttaaataaa tggaatcaca caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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