LOCUS BC053687 2160 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
MGC:61583 IMAGE:5214077), complete cds.
ACCESSION BC053687
VERSION BC053687.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2160)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2160)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: d Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55775473.
FEATURES Location/Qualifiers
source 1..2160
/db_xref="H-InvDB:HIT000053980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61583 IMAGE:5214077"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2160
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
CDS 138..812
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/codon_start=1
/product="zinc finger protein 22 (KOX 15)"
/protein_id="AAH53687.1"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
/translation="MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFS
RLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHR
RIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRT
HTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRK
SVAGLR"
BASE COUNT 707 a 392 c 421 g 640 t
ORIGIN
1 cggcgcggga ggcgcccagc gagccagagt ggtggctggt cccgcgcgaa aattctgagc
61 tgtacacctc taggaaatga aacactagtt cagaagaagc ctgtaaactc tcttacaaat
121 acatttggtt attcaccatg aggttagcaa agcctaaagc gggtatttct cggagctcaa
181 gccaaggaaa ggcctatgag aacaagcgca aaacaggccg gcagcggcag aagtggggca
241 tgactattcg atttgactca agcttcagta gactcagaag aagcttggat gacaaaccct
301 ataaatgtac tgaatgtgaa aagagtttca gtcagagttc aactcttttt caacaccaga
361 agatccatac tggaaagaaa tcccataaat gtgctgattg tgggaaaagt ttctttcaga
421 gttctaatct cattcagcat cgacggatcc atacggggga aaagccctac aaatgtgatg
481 agtgtggaga aagcttcaaa cagagctcaa atctcattca gcaccagaga attcatactg
541 gagaaaaacc ctatcagtgt gatgagtgtg gccggtgttt cagccagagc tcccacctta
601 ttcaacatca gagaacccac actggggaga aaccctacca gtgcagtgaa tgtggcaaat
661 gtttcagtca gagctctcat ctgaggcagc acatgaaggt gcataaagaa gagaagcctc
721 gtaaaacccg gggcaaaaat atcagggtga agactcactt accctcttgg aaagctggta
781 caggaaggaa gtctgtggct ggtctccgtt aagtataggg ctttttgaca gctttttgag
841 acctcttaag aaaaaataaa aagtaaaaaa tgaaaggaat cttttttaga aatagagatg
901 ctttatagta gatcacttaa atactggatc ttttgctagt gtgaaaacat tgggaattta
961 atgacattat tgagctgaaa gaaattacat gagtccagct accctcattt cttttttatg
1021 tgacatggag cacaaagaac tgaaaatatg ttttgaggga gcatgacatc cttgacctca
1081 tttgaaatta cttccatttt caaaaaccat catgttttgc agatacattt tgagaaaaac
1141 catcatgttt tgaggataca tttgtgaaag tgcaggcatg ccaatgacta ctcagtttta
1201 ggacttttgt ggaagaaaaa attaaaaggg agaagaaatc aattccacta cttttgaagt
1261 tctgcaacag atgagatttt gtttgtaaag ttttgtagta tattaaccat tggtttatca
1321 ctctagattc aacatattaa aatgtattca agctcacaga tttttaatca gtaaggccta
1381 tctatattag ttgtctttta tttcttctcc ttgtggacag ttgttaatga aaggagtaag
1441 gatttccctt tttttgtttt gtttgttttg ttttttttaa ccaaattctt agagatacta
1501 tagaatccaa atgagaactg aattggacct caagtcttct attcctacta atagagttct
1561 ttgtgatggt aactgctgtg tcgtttgttt tccacaagtt gggatggatt catgtcgata
1621 catccccatg cccttgacct cttctggcat tctcctgtgc tctgacaaac tgagccagcc
1681 ttttagatct acatgaataa acaaactatt ttaccaagaa aaatctcagc ttgcttactg
1741 cttaattaaa aacctacaat ttacacacct ccctgccttc aagactgtga gctttggata
1801 gccctgctta aatgtttgtc aacaacaaga gtcgtaatgt gtcagtacat tgtagctcct
1861 ttgaaattta actctttctg tgttacatga attgttttaa ggagtccggc aaacatgttt
1921 cttcacttcc atgagaatgg tgccaagtgt cagactctaa tgagccctca gctcaggttt
1981 taatttctat tgaatgctaa cattcttctg attttttggt atcttttata atcatatcgg
2041 tttctgctgt attaatgaca attattcatg aaaataaaaa atgaaatatt ttgtatacta
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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