LOCUS BC053665 873 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens tetratricopeptide repeat domain 9C, mRNA (cDNA clone
MGC:61569 IMAGE:6153096), complete cds.
ACCESSION BC053665
VERSION BC053665.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222234.
FEATURES Location/Qualifiers
source 1..873
/db_xref="H-InvDB:HIT000053967"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61569 IMAGE:6153096"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..873
/gene="TTC9C"
/gene_synonym="MGC29649"
/db_xref="GeneID:283237"
/db_xref="HGNC:HGNC:28432"
/db_xref="IMGT/GENE-DB:28432"
/db_xref="MIM:28432"
CDS 122..637
/gene="TTC9C"
/gene_synonym="MGC29649"
/codon_start=1
/product="TTC9C protein"
/protein_id="AAH53665.1"
/db_xref="GeneID:283237"
/db_xref="HGNC:HGNC:28432"
/db_xref="IMGT/GENE-DB:28432"
/db_xref="MIM:28432"
/translation="MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPS
LPSPLPNLGPQGPALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLE
RQPDNAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHR
KEKQLYLGMFG"
BASE COUNT 249 a 214 c 217 g 193 t
ORIGIN
1 cttcttgaga aaaagactgc agaaaggaga ggtggggctt tcagtagaaa caagcaaacc
61 gcaggtccct gtggggggac tctccaggaa gaaggttccg caagaaccgt gggcgacagt
121 tatggagaag cgtctgcagg aggctcagct gtacaaggag gaagggaacc agcgctaccg
181 ggaagggaag taccgagatg ctgtgagtag gtaccatcga gctctgcttc agctgcgggg
241 tctggatccg agtctgccct ctccgttacc taatctcgga cctcagggcc cggccctcac
301 gcctgaacaa gaaaacatac tgcataccac ccagacagac tgctataaca atctagctgc
361 ttgtctcctt cagatggagc ccgtgaacta cgaacgagtg agagaatata gtcagaaagt
421 cctggaacga cagcctgata atgccaaggc cttgtatcgg gccggagtgg cctttttcca
481 tctgcaggac tatgaccagg cccgccacta cctcctggct gccgtgaata ggcagcctaa
541 agatgctaac gtccggcggt acctccagct gacacagtca gaactcagca gctaccatag
601 aaaagagaag cagctctacc tgggcatgtt tggttaacaa agaagaaaga tgctcctcca
661 gttgaactta ggtggaccat taaacatgca tgaaggagaa atctgagcct cagcaagaga
721 aattaaccct atacctctga cccaggtgga tttttgtttc tagttctgca caaacttcac
781 tacttagaca gtctgagtct ttttctgtct atccatctgt ttatttctat acctttcaat
841 acatgttatt gttgcagaaa aaaaaaaaaa aaa
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