LOCUS BC053647 2261 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens FERM domain containing 5, mRNA (cDNA clone MGC:61436
IMAGE:5578205), complete cds.
ACCESSION BC053647
VERSION BC053647.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2261)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2261)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52840100.
FEATURES Location/Qualifiers
source 1..2261
/db_xref="H-InvDB:HIT000053955"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61436 IMAGE:5578205"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2261
/gene="FRMD5"
/gene_synonym="MGC14161"
/db_xref="GeneID:84978"
/db_xref="HGNC:HGNC:28214"
CDS 178..1890
/gene="FRMD5"
/gene_synonym="MGC14161"
/codon_start=1
/product="FERM domain containing 5"
/protein_id="AAH53647.1"
/db_xref="GeneID:84978"
/db_xref="HGNC:HGNC:28214"
/translation="MLSRLMSGSSRSLEREYSCTVRLLDDSEYTCTIQRDAKGQYLFD
LLCHHLNLLEKDYFGIRFVDPDKQRHWLEFTKSVVKQLRSQPPFTMCFRVKFYPADPA
ALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLAAYILQAEIGDYDSGKHPEGYSSK
FQFFPKHSEKLERKIAEIHKTELSGQTPATSELNFLRKAQTLETYGVDPHPCKDVSGN
AAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYVSQKEEKKIILTYFAPT
PEACKHLWKCGIENQAFYKLEKSSQVRTVSSSNLFFKGSRFRYSGRVAKEVMESSAKI
KREPPEIHRAGMVPSRSCPSITHGPRLSSVPRTRRRAVHISIMEGLESLRDSAHSTPV
RSTSHGDTFLPHVRSSRTDSNERVAVIADEAYSPADSVLPTPVAEHSLELMLLSRQIN
GATCSIEEEKESEASTPTATEVEALGGELRALCQGHSGPEEEQVNKFVLSVLRLLLVT
MGLLFVLLLLLIILTESDLDIAFFRDIRQTPEFEQFHYQYFCPLRRWFACKIRSVVSL
LIDT"
BASE COUNT 605 a 559 c 585 g 512 t
ORIGIN
1 ggctgaggga aggaggagga taaggaggag gaacgaggcc agcaggaggc aacggcagcg
61 acggggccgg ggtgatggtg caggtgcctg gggtcggtgc ggagctgccg ggctgaggga
121 cgcctggtcc agggtccgca gcgccgccgc gtcgctcccg ggcgggcggg cgggaagatg
181 ctgagcaggt tgatgagcgg cagcagcagg agcctggagc gcgagtacag ctgcaccgtg
241 cggctgctgg acgacagcga gtacacctgc accatccaga gagatgccaa aggccagtac
301 ctgtttgacc ttctttgcca ccatctgaac ctacttgaga aagactattt tggtatccgc
361 tttgtagacc cagataagca gcggcattgg ctggaattta caaagtctgt ggtgaaacaa
421 ttgagatccc agcctccatt caccatgtgc ttccgtgtga agttttatcc tgcagaccct
481 gctgctctga aagaagaaat aaccaggtat ttagtcttcc tgcagatcaa aagggatctc
541 taccatggcc gactcctctg taaaacatcg gatgctgcct tgttagcagc ttacatcctt
601 caagcggaga ttggggatta tgactcaggg aaacaccctg aaggctacag ctccaagttc
661 cagtttttcc ctaaacattc agagaagctg gaaaggaaaa ttgctgagat tcacaagacg
721 gaactgagtg gtcaaacacc agcaacatca gagctgaact tcttaagaaa agcacagaca
781 ttggaaacat atggagtgga tcctcaccca tgtaaggacg tgtcaggaaa tgctgcattt
841 ctggccttca ctccttttgg gtttgttgtt cttcaaggaa acaagagggt ccacttcatt
901 aaatggaatg aggtgaccaa gctgaaattt gaaggaaaga ctttctattt atacgtaagt
961 cagaaagagg aaaagaaaat tattcttaca tattttgctc caactcctga agcgtgtaag
1021 cacctctgga aatgtggaat cgagaaccaa gccttctaca agctggagaa gtcaagccaa
1081 gtccgcacag tgtccagcag caatttattc tttaaaggga gccggttccg atacagtggc
1141 cgagttgcaa aggaagtcat ggaatcaagt gctaagatca aacgggagcc accggaaata
1201 cacagagcag ggatggttcc cagccggagc tgtccctcca taacccatgg cccaaggctg
1261 agcagcgtcc ccaggacccg cagaagagct gttcacatct ccatcatgga aggcctagag
1321 tccttacggg acagtgccca ttccacacca gtgcgttcca cttcccatgg ggacaccttc
1381 ctgcctcacg tgagaagcag ccggacagat agcaatgagc gagtagctgt gattgcagac
1441 gaggcctaca gccctgcaga cagcgtgctg cccacccctg tggctgagca cagcctggag
1501 ctgatgttgc tttcccggca gatcaatgga gccacctgca gcattgagga ggagaaggaa
1561 tctgaagcca gcaccccaac tgctacagag gtggaggccc ttgggggaga gctgagggcc
1621 ctgtgtcagg ggcacagcgg gcccgaggag gaacaggtga ataagtttgt tctaagtgtc
1681 ctccgtttgc tccttgtgac catgggactc ctctttgttt tgctcctcct cctgatcatc
1741 cttaccgagt ctgaccttga cattgccttt ttccgtgata tccgccagac ccccgagttt
1801 gaacaattcc actatcaata cttttgtccc ctcaggcgat ggtttgcctg caaaatccgc
1861 tcagtggtga gcctgctcat tgacacctga gaaggcatga ctcctcccaa aaactagcca
1921 ggtggaccaa ggaacccggc tacccattcc cagcaatggg acccatcgcg gaaccatcgg
1981 cacatatacc aagtcctcct ctcatgactc aaagtccact gcagcctagg agggtgtttc
2041 ccagaagaag aaagggatag gctcatgccc tgtctaaaca aactgggaaa actcattttc
2101 ttcagaagtt atttcaagaa aggctcagcg actctgtttc tcatctttcc aatttgcagg
2161 ataatttttg gttttgaatt ttgatttttc atagatgtat attattttga agtatcaaat
2221 aaaaataatt tattttacta ttaaaaaaaa aaaaaaaaaa a
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