LOCUS BC053618 1785 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens NOTCH-regulated ankyrin repeat protein, mRNA (cDNA
clone MGC:61598 IMAGE:6143133), complete cds.
ACCESSION BC053618
VERSION BC053618.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1785)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1785)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51972283.
FEATURES Location/Qualifiers
source 1..1785
/db_xref="H-InvDB:HIT000053942"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61598 IMAGE:6143133"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1785
/gene="NRARP"
/db_xref="GeneID:441478"
/db_xref="HGNC:HGNC:33843"
CDS 324..668
/gene="NRARP"
/codon_start=1
/product="NOTCH-regulated ankyrin repeat protein"
/protein_id="AAH53618.1"
/db_xref="GeneID:441478"
/db_xref="HGNC:HGNC:33843"
/translation="MSQAELSTCSAPQTQRIFQEAVRKGNTQELQSLLQNMTNCEFNV
NSFGPEGQTALHQSVIDGNLELVKLLVKFGADIRLANRDGWSALHIAAFGGHQDIVLY
LITKAKYAASGR"
BASE COUNT 285 a 633 c 559 g 308 t
ORIGIN
1 ggcgccttgg gaccgcgtgg gagccgcagc cgaaccgagt agggaccggg accgcgcggc
61 gccgccgtcc ccggccgggc ccggcccccg cgagccgagc gcgcgccccc gtcgcccacc
121 cgggcgcggc tggatgcggc ggggtccccg cggcggcgac ccccggcccc gagcgcccgg
181 agcgcccaga ggcggcgtgc ggggcccggg gacgccgcgc cctccatgcg ccgaggcgcg
241 ccccgagaca gccgggggcc cgcgccgcag ccgccgcccg cgctgagccc cggcccggcc
301 cgcggcccgc gcccggcggc agcatgagcc aggccgagct gtccacctgc tccgcgccgc
361 agacgcagcg catcttccag gaggctgtgc gcaagggcaa cacgcaggag ctgcagtcgc
421 tgctgcagaa catgaccaac tgcgagttca acgtgaactc gttcgggccc gagggccaga
481 cggcgctgca ccagtcggtc atcgacggca acctggagct cgtgaagctg ctggtcaagt
541 tcggcgccga catccgcctg gccaaccgcg acggctggag cgcgctgcac atcgccgcgt
601 tcggtggcca ccaggacatc gtgctctatc tcatcaccaa ggcgaagtac gcggccagcg
661 gccggtgatg cccgccggga ccccggaccc cggccctgcg cccgcgtcgt ctctgctgta
721 ccttcccgcc aactacctcg gtgcgcgccc ggctcgcagg ccccgccaga aggcccgtgg
781 ccacggcgaa tacggcgcgt gcgtcccggc cccagggtcc ggcagccccg ccggccgagc
841 gcctccctgc ggcctagccg ggcccggccg ggccggagca gcttcccacg gcccccaccc
901 gctcgcctgc ccgccgcctc gcgggtgggg gcggggcgcg ggctccagcc ccttttgaaa
961 tttgagtctc gcaaccagca agttcggaat cccgagatac cggatcctct gcgcaaaatg
1021 ttttctcccg aaggtgaaag gcgggcggcg ggagccgaag gcggactcgg agcgctccgc
1081 cgccgccttc aggacccgcc cgcaggcccg ggacgcgccg atgccggctg cagccgagga
1141 gcagccccga ggtccgaggt ccgcgccgct ggcgcgcggc cgaggagacg ctcggctgtt
1201 cgctgttgct ggtgttctaa actatttatc ttgtgtgtgt acatttgtgg gtggagtttg
1261 tgcgcctggt ttttttgttt ggaaaacact gcgtggtcaa tgtggttatg ggggggagtg
1321 atgcattttt ttctagtctt aaaactaaaa acttgagtct accatttctt ggttgcactg
1381 aaaataccgc ccagcctgat ggtgttcccg tgctgtccct cccccttccc ttctccccgc
1441 gtctacctcc ccaccccgtt ctgttccccc tccctccttc tccctctccc tcaaatccgt
1501 gagttttgga agccccaggg cctctctccc ccgcccctcc tggatgaggc caccatcccc
1561 ccaaaccggc ttgttttgca gtttccccag gatcctggaa gctcgctggc gctcgagggt
1621 ggcggggaca cgggggggtg ggtgaaggtt cgttaccttt tctagtgcgt tctatcatag
1681 ttaacggttg cacacttttt taaaaaaagt aaatggattt gccacaatta aatgtcataa
1741 catttatgac agaatataaa atattaacat aaaaaaaaaa aaaaa
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