LOCUS BC053592 904 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens uridine phosphorylase 1, mRNA (cDNA clone
IMAGE:5724026), complete cds.
ACCESSION BC053592
VERSION BC053592.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 904)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507838
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..904
/db_xref="H-InvDB:HIT000259301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5724026"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..904
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
CDS 488..799
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/codon_start=1
/product="UPP1 protein"
/protein_id="AAH53592.1"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
/translation="MCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMES
SVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKLSK
A"
misc_feature 488..709
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/note="Udp; Region: Uridine phosphorylase [Nucleotide
transport and metabolism]"
/db_xref="CDD:COG2820"
BASE COUNT 215 a 239 c 282 g 168 t
ORIGIN
1 gcattgcgtt tgtcgccggt gtcgcagtgc gaggatggcg ccgcgggtgt agcggctctc
61 tgcgcaggcc gagtgggctt ggtgaggtga ctcgcggtcg cgggtgactc gccggcagga
121 cactgcctgg aacgcctgga gcgcctccca ctgcagacgt ctgtccgcct ccagccgctc
181 tcctctgacg ggtcctgcct cagttggcgg aatggcggcc acgggagcca atgcagagaa
241 agctgaaagt cacaatttgt gtgtgttggt ggaagcccct cccggatgaa agccttcatc
301 aggtctggag cccggcactg tggtcataac agagcaggca gtggatacct gcttcaaggc
361 agagtttgag cagattgtcc tggggaagcg ggtcatccgg aaaacggacc ttaacaagaa
421 gctggtgcag gagctgttgc tgtgttctgc agagctgagc gagttcacca cagtggtggg
481 gaacaccatg tgcaccttgg acttctatga agggcaaggc cgtctggatg gggctctctg
541 ctcctacacg gagaaggaca agcaggcgta tctggaggca gcctatgcag ccggcgtccg
601 caatatcgag atggagtcct cggtgtttgc cgccatgtgc agcgcctgcg gcctccaagc
661 ggccgtggtg tgtgtcaccc tcctgaaccg cctggaaggg gaccagatca gcagccctcg
721 caatgtgctc agcgagtacc agcagaggcc gcagcggctg gtgagctact tcatcaagaa
781 gaaactgagc aaggcctgag cgctgccctg cacctccgca gacctgctgt gatgacttgc
841 cattaaaagc attgtccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaa
//