LOCUS BC053569 3589 bp mRNA linear HUM 06-APR-2004
DEFINITION Homo sapiens family with sequence similarity 13, member A1, mRNA
(cDNA clone IMAGE:6472389), partial cds.
ACCESSION BC053569
VERSION BC053569.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3589)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3589)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..3589
/db_xref="H-InvDB:HIT000259289"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6472389"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1074 a 820 c 882 g 813 t
ORIGIN
1 acgcgtccgg tgggttcagc ggaaagagaa gcaaaaccat tcttcctaaa atgttagaag
61 ctgctcttcg cttaccttgg ggcctttgca ttgggagctg tttttcacat caaagaatat
121 gtgctgaatg gaattttagt attttgctgt cgttttaata ttttcgtctg gtcttcctca
181 gttcttccag acgctttctg agagaatggg ggcaggagct ctagccatct gtcaaagtaa
241 agcagcggtt cggctgaaag aagacatgaa aaagatagtg gcagtgccat taaatgaaca
301 gaaggatttt acctatcaga agttatttgg agtcagtctc caagaacttg aacggcaggg
361 gctcaccgag aatggcattc cagcagtagt gtggaatata gtggaatatt tgacgcagca
421 tggacttacc caagaaggtc tttttagggt gaatggtaac gtgaaggtgg tggaacaact
481 tcgactgaag ttcgagagtg gagtgcccgt ggagctcggg aaggacggtg atgtctgctc
541 agcagccagt ctgttgaagc tgtttctgag ggagctgcct gacagtctga tcacctcagc
601 gttgcagcct cgattcattc aactctttca ggtgtgccac ctgggcttga aggcatgaag
661 gaacaggacc tgtgcaacaa gataatggct aaaattctag aaaattacaa taccctgttt
721 gaagtagagt atacagaaaa tgatcatctg agatgtgaaa acctggctag gcttatcata
781 gtaaaagagg tctattataa gaactccctg cccatccttt taacaagagg cttagaaaga
841 gacatgccaa aaccacctcc aaaaaccaag aatatggaaa gtctcaattc cacacgatct
901 catgagagaa ctggacctga tgattttgaa tggatgtctg atgaaaggaa aggaaatgaa
961 aaagatggtg gacacactca gcattttgag agccccacaa tgaagatcca ggagcatccc
1021 agcctatctg acaccaaaca gcagagaaat caagatgccg gtgaccagga ggagagcttt
1081 gtctccgaag tgccccagtc ggacctgact gcattgtgtg atgaaaagaa ctgggaagag
1141 cctatccctg ctttctcctc ctggcagcgg gagaacagtg actctgatga agcccacctc
1201 tcgccgcagg ctgggcgcct gatccgtcag ctgctggacg aagacagcga ccccatgctc
1261 tctcctcggt tctacgctta tgggcagagc aggcaatacc tggatgacac agaagtgcct
1321 ccttccccac caaactccca ttctttcatg aggcggcgaa gctcctctct ggggtcctat
1381 gatgatgagc aagaggacct gacacctgcc cagctcacac gaaggattca gagccttaaa
1441 aagaagatcc ggaagtttga agatagattc gaagaagaga agaagtacag accttcccac
1501 agtgacaaag cagccaatcc ggaggttctg aaatggacaa atgaccttgc caaattccgg
1561 agacaactta aagaatcaaa actaaagata tctgaagagg acctaactcc caggatgcgg
1621 cagcgaagca acacactccc caagagtttt ggttcccaac ttgagaaaga agatgagaag
1681 aagcaagagc tggtggataa agcaataaag cccagtgttg aagccacatt ggaatctatt
1741 cagaggaagc tccaggagaa gcgagcggaa agcagccgcc ctgaggacat taaggatatg
1801 accaaagacc agattgctaa tgagaaagtg gctctgcaga aagctctgtt atattatgaa
1861 agcattcatg gacggccggt aacaaagaac gaacggcagg tgatgaagcc actatacgac
1921 aggtaccggc tggtcaaaca gatcctctcc cgagctaaca ccatacccat cattggttcc
1981 ccctccagca agcggagaag ccctttgctg cagccaatta tcgagggcga aactgcttcc
2041 ttcttcaagg agataaagga agaagaggag gggtcagaag acgatagcaa tgtgaagcca
2101 gacttcatgg tcactctgaa aaccgatttc agtgcacgat gctttctgga ccaattcgaa
2161 gatgacgctg atggatttat ttccccaatg gatgataaaa taccatcaaa atgcagccag
2221 gacacagggc tttcaaatct ccatgctgcc tcaatacctg aactcctgga acacctccag
2281 gaaatgagag aagaaaagaa aaggattcga aagaaacttc gggattttga agacaacttt
2341 ttcagacaga atggaagaaa tgtccagaag gaagaccgca ctcctatggc tgaagaatac
2401 agtgaatata agcacataaa ggcgaaactg aggctcctgg aggtgctcat cagcaagaga
2461 gacactgatt ccaagtccat gtgaggggca tggccaagca cagggggctg gcagctgcgg
2521 tgagagttta ctgtccccag agaaagtgca gctctggaag gcagccttgg ggctggccct
2581 gcaaagcatg cagcccttct gcctctagac catttggcat cggctcctgt ttccattgcc
2641 tgccttagaa actggctgga agaagacaat gtgacctgac ttaggcattt tgtaattgga
2701 aagtcaagac tgcagtatgt gcacatgcgc acgcgcatgc acgcacacac acacacagta
2761 gtggagcttt cctaacacta gcagagatta atcactacat tagacaacac tcatctacag
2821 agaatataca ctgttcttcc ctggataact gagaaacaag agaccattct ctgtctaact
2881 gtgataaaaa caagctcagg actttattct atagagcaaa cttgctgtgg agggccatgc
2941 tctccttgga cccagttaac tgcaaacgtg cattggagcc ctatttgctg ccgctgccat
3001 tctagtgacc tttccacaga gctgcgcctt cctcacgtgt gtgaaaggtt ttccccttca
3061 gccctcaggt agatggaagc tgcatctgcc cacgatggca gtgcagtcat catcttcagg
3121 atgtttcttc aggacttcct cagctgacaa ggaattttgg tccctgccta ggaccgggtc
3181 atctgcagag gacagagaga tggtaagcag ctgtatgaat gctgatttta aaaccaggtc
3241 atgggagaag agcctggaga ttctttcctg aacactgact gcacttacca gtctgatttt
3301 atcgtcaaac accaagccag gctagcatgc tcatggcaat ctgtttgggg ctgttttgtt
3361 gtggcactag ccaaacataa aggggcttaa gtcagcctgc atacagagga tcggggagag
3421 aaggggcctg tgttctcagc ctcctgagta cttaccagag tttaattttt ttaaaaaaaa
3481 tctgcactaa aatccccaaa ctgacaggta aatgtagccc tcagagctca gcccaaggca
3541 gaatctaaat cacactattt tcgagatcat gtataaaaaa aaaaaaaaa
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