LOCUS BC053561 1576 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class II, type 9B, mRNA (cDNA clone
IMAGE:6164343), complete cds.
ACCESSION BC053561
VERSION BC053561.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1576)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1576)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: m Column: 23
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1576
/db_xref="H-InvDB:HIT000053919"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6164343"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1576
/gene="ATP9B"
/gene_synonym="ATPASEP"
/gene_synonym="ATPIIB"
/gene_synonym="DKFZp686H2093"
/gene_synonym="HUSSY-20"
/gene_synonym="NEO1L"
/db_xref="GeneID:374868"
/db_xref="HGNC:HGNC:13541"
CDS 78..488
/gene="ATP9B"
/gene_synonym="ATPASEP"
/gene_synonym="ATPIIB"
/gene_synonym="DKFZp686H2093"
/gene_synonym="HUSSY-20"
/gene_synonym="NEO1L"
/codon_start=1
/product="ATP9B protein"
/protein_id="AAH53561.1"
/db_xref="GeneID:374868"
/db_xref="HGNC:HGNC:13541"
/translation="MPLMMSEEGFENEESDYHTLPRARIMQRKRGLEWFVCDGWKFLC
TSCCGWLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQF
KFFLNLYFLVISCSQFVPALKIGYLYTYWAPLMT"
BASE COUNT 598 a 333 c 298 g 347 t
ORIGIN
1 gcgccgcggg gcccaggccg ggagccgacc ggcacagcag gtaccagctg gaggatgagt
61 ctgcgcattt ggatgaaatg ccactaatga tgtctgaaga aggctttgag aatgaggaaa
121 gtgattacca caccttacca cgagccagga taatgcaaag gaaaagagga ctggagtggt
181 ttgtctgtga tggctggaag ttcctctgta ccagttgctg tggttggctg ataaatattt
241 gtcgaagaaa gaaagagctg aaagctcgca cagtatggct tggatgtcct gaaaagtgtg
301 aagaaaaaca tcccaggaat tctataaaaa atcaaaaata caatgtgttt acctttatac
361 ctggggtttt gtatgaacaa ttcaagtttt tcttgaatct ctattttcta gtaatatcct
421 gctcacagtt tgtaccagca ttgaaaatag gctatctcta cacctactgg gctcctctga
481 tgacatgatt gtttatctag aaaaccccat cgtctcagcc caaaatctcc ttaagctgat
541 aagcaacttc agcaaagtct caggatacaa aatcaatgta caaaaatcac aagcattctt
601 atacaccaac aacagacaaa cagagagcca aatcatgaat gaactcccat tcacaattgc
661 ttcaaagaga ataaaatacc taggaatcca acttacaagg gatgtgaagg acctcttcaa
721 ggagaactac aaaccactgc tcaaggaaat aaaagaggac acaaacaaat ggaagaacat
781 tccatgctca tgggtaggaa gaatcaatat cgtgaaaatg gccatactgc ccaaggtaat
841 ttacagattc aatgccatcc ccatcaagct accaatgact ttcttcacag aattggaaaa
901 aactacttta cagttcatat ggaaccaaaa aagagtctgc atcgccaaat caatcctaag
961 ccaaaagaac aaagctggag gcatcacact acctgacttc aaactatact acaaggctac
1021 agtaaccaaa acagcatggt actggtacca aaacagagat atagatcaat ggaacagaag
1081 agagccctca gaaataatgc cgcatatcta caactatctg atctttgaca aacctgagaa
1141 aaacaagcaa tggggaaagg attccctatt taataaatgg tgctgggaaa actggctagc
1201 catatgtaga aagctgaaac tggatccctt ccttacacct tatacaaaaa tcaattcaag
1261 atggattaaa gatttaaacg ttagacctaa aaccataaaa accctagaag aaaacctagg
1321 caataccatt caggacatag gcatgggcaa ggacttcatg tccaaaacac caaaagcaat
1381 ggcaacaaaa gccaaaattg acaaatggga tctaattaaa ctcaagagct tctgcacagc
1441 aaaagaaact accatcagag tgaacaggca acctacaaca tgggagaaaa ttttcgcaac
1501 ctactcatct gacaaagggc taatatccag aatctacaat gaactcaaac aaatttacaa
1561 gaaaaaaaaa aaaaaa
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