LOCUS BC053538 1890 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetratricopeptide repeat domain 5, mRNA (cDNA clone
MGC:61685 IMAGE:5225152), complete cds.
ACCESSION BC053538
VERSION BC053538.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308431.
FEATURES Location/Qualifiers
source 1..1890
/db_xref="H-InvDB:HIT000053906"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61685 IMAGE:5225152"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1890
/gene="TTC5"
/gene_synonym="Strap"
/db_xref="GeneID:91875"
/db_xref="HGNC:HGNC:19274"
CDS 6..1328
/gene="TTC5"
/gene_synonym="Strap"
/codon_start=1
/product="tetratricopeptide repeat domain 5"
/protein_id="AAH53538.1"
/db_xref="GeneID:91875"
/db_xref="HGNC:HGNC:19274"
/translation="MMADEEEEVKPILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQ
DVRKEMEKTLQQMEEVVGSVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPEL
VEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHH
VMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDR
KASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTS
LLESKGKVKTKKLQSMLGSLRPAHLGPCSDGHYQSASGQKVTLELKPLSTLQPGVNSG
AVILGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNIVQSWGVLIGDSVAIPEPNLR
LHRIQHKGKDYSFSSVRVETPLLLVVNGKPQGSSSQAVATVASRPQCE"
BASE COUNT 523 a 428 c 480 g 459 t
ORIGIN
1 gggagatgat ggctgatgaa gaggaagaag tcaagccgat cttgcagaaa ttgcaggaac
61 tcgtggatca gctctactca tttcgagact gctatttcga gacacatagt gttgaggatg
121 ctgggaggaa gcaacaggat gtgcggaagg agatggagaa aaccctacag cagatggaag
181 aagtagtggg ttctgtccag ggcaaggcac aagttctaat gctaactggg aaagcactaa
241 atgtgactcc tgactatagc cctaaggctg aggagcttct gtcaaaggct gtgaagctgg
301 agcccgagct ggtggaagcc tggaaccagc tgggtgaggt gtactggaaa aaaggggatg
361 ttgcagctgc ccacacctgc ttctcaggag ccctcaccca ttgcaggaac aaagtctcct
421 tgcaaaacct gtcaatggtg cttcgtcagc tgcggactga cactgaagat gaacattctc
481 accatgtcat ggacagtgtc cgacaggcta agttggctgt tcagatggat gtccatgatg
541 gccgctcctg gtatattctt gggaattcat atctttccct ttacttctct actggccaga
601 accctaagat ctcccagcaa gccctcagtg cctatgccca agcagagaaa gttgacagaa
661 aagcttctag caatcctgac cttcatctga acagggcgac gttgcataaa tatgaagaga
721 gttatgggga ggccctggag ggcttctctc gggctgcagc cctggaccct gcctggccag
781 agccccggca acgagagcaa caacttctgg aattcctgga tagattaacc agcctccttg
841 agagtaaggg aaaggtgaag accaaaaagc tgcagagcat gctgggaagc ttgcgcccag
901 cccatctagg cccttgcagt gatgggcact atcagtcagc ctctgggcag aaagtgaccc
961 tggagctcaa gccactgagt acgcttcagc ctggggtgaa cagcggtgcc gtcatcctgg
1021 gaaaggtggt atttagcctc accacagagg agaaagtccc ctttacattt ggcctggtag
1081 attcagatgg accttgctat gcagtgatgg tgtacaatat agtgcagagc tggggagtgc
1141 tcattggaga ctctgtagcc attcctgagc ccaacctgcg gcttcaccga attcagcaca
1201 aaggaaagga ctattccttt tccagtgttc gagtggagac gcccctcctg ctagtggtga
1261 atgggaagcc tcagggatcc agcagccagg ctgttgccac agtggcatcg cgaccacagt
1321 gtgaatgacc tttgacttgc atgctcaaca gggagtggag gagaggagac aaggctctgg
1381 acagccggtc cagccacatc cagtgattca gcagggatgg gaggaatgtt ttaaatgaag
1441 actttctctt tccctgcctg tattacactt cgtatctctt ctctctcctc tgtcctcatc
1501 atgttccagc tctctacagg gccacatact cttctggcat atctctcctg tctcttccac
1561 tgctctctat gttttaagca aagagcatgg aattggtaga agtcttggga tcttgccatg
1621 ggacagagtc cccaaggttc ctgttgttgc ctccttccta agcctcatat gtatatatca
1681 gttcagtatt tattgctaaa ggagggggct taattttgta atggctttta tttttagcaa
1741 tttttatttt tatttttgaa ctttaggtcc ttcctcttct ttggggctgg aacagaatta
1801 aatttgtttg gaaaaaaaaa aaaaaacaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//