LOCUS BC053327 4328 bp mRNA linear HTC 27-MAY-2005 DEFINITION Homo sapiens heterochromatin protein 1, binding protein 3, mRNA (cDNA clone IMAGE:6573235), with apparent retained intron. ACCESSION BC053327 VERSION BC053327.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4328) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4328) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: n Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..4328 /db_xref="H-InvDB:HIT000259248" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6573235" /tissue_type="Prostate, carcinoma" /clone_lib="NIH_MGC_40" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 1174 a 968 c 986 g 1200 t ORIGIN 1 cgaggctcgc gttccgccgc tgcttccgtc gccggggcgg gcgccgcggt gtccctgccg 61 agcgtgagcc ccgaactgtc accgcgccga gccccagcct catccgtcgg tgtccgcggt 121 ccgagctttc cccgcctcgc tggcggcccg cgctctcccc cgccgtgcgc gttcgccgct 181 gtggcctgta gctacctcgc ctcgctgctt tgtctccgct gctcttgccg tccttcccgc 241 ggccttctgc gggcggggct gtcggctgtc gctttgctgc tccgcgacgg cggccttgag 301 tctcgctccc ccggtgggaa acgtagaact ggttactcgc caccttaggc ggtggggttt 361 gaatgagagc ggtgcctcgg taggtcgtca gaaagttaca gtcgcccatc tgagcgtttg 421 taagagatgg aggcaggagt ggtgaggttg attcttcacc acactgaaac cattaggaaa 481 aatccttgtg gttaacagca gaggcttcag agtgtaacct gtactcgggc ctagaaatta 541 tttaaaatgg cgactgatac gtctcaaggt gaactcgtcc atcctaaggc actcccactt 601 atagtaggag ctcagctgat ccacgcggac aagaaggtag aagatagcac catgccgatt 661 cgtcgaactg tgaattctac ccgggaaact cctcccaaaa gcaagcttgc tgaaggggag 721 gaagaaaagc cagaaccaga cataagttca gaggaatctg tctccactgt agaagaacaa 781 gagaatgaaa ctccacctgc tacttcgagt gaggcagagc agccaaaggg ggaacctgag 841 aatgaagaga aggaagaaaa taagtcttct gaggaaacca aaaaggatga gaaagatcag 901 tctaaagaaa aggagaagaa agtgaaaaaa acaattcctt cctgggctac cctttctgcc 961 agccagctag ccagggccca gaaacaaaca ccgatggctt cttccccacg tcccaagatg 1021 gatgcaatct taactgaggc cattaaggca tgcttccaga agagtggtgc atcagtggtt 1081 gctattcgaa aatacatcat ccataagtat ccttctctgg agctggagag aaggggttat 1141 ctccttaaac aagcactgaa aagagaatta aatagaggag tcatcaaaca ggttaaagga 1201 aaaggtgctt ctggaagttt tgttgtggtt cagaaatcaa gaaaaacacc tcagaaatcc 1261 agaaacagaa agaataggag ctctgcagtg gatccagaac cacaagtaaa attggaggat 1321 gtcctcccac tggcctttac tcgcctttgt gaacctaaag aagcttccta cagtctcatc 1381 aggaaatatg tgtctcagta ttatcctaag cttagagtgg acatcaggcc tcagctgttg 1441 aagaacgctc tgcagagagc agtagagagg ggccagttag aacagataac tggcaaaggt 1501 gcttcgggga cattccagct gaagaaatca ggggagaaac ccctgcttgg tggaagcctg 1561 atggaatatg caatcttgtc tgccattgct gccatgaatg agccgaagac ctgctctact 1621 actgctctga agaagtatgt cctagagaat cacccaggaa ccaattctaa ctatcaaatg 1681 catttgctga aaaaaaccct gcagaaatgc gaaaagaatg ggtggatgga acagatctct 1741 gggaaagggt tcagtggcac cttccagctc tgttttccct attatcccag cccaggagtt 1801 ctgtttccga agaaagagcc agatgattct agagatgagg atgaagatga agatgagtca 1861 tcagaagaag actctgagga tgaagagccg ccacctaaga gaaggttgca gaagaaaacc 1921 ccagccaagt ccccagggaa ggccgcatct gtgaagcaga gagggtccaa acctgcacct 1981 aaagtctcag ctgcccagcg ggggaaagct aggcccttgc ctaagaaagc acctcctaag 2041 gccaaaacgc ctgccaagaa gaccagacct tcatccacag tcatcaagaa acctagtggt 2101 ggctcctcaa agaagcctgc aaccagtgca agaaaggaag taaaattgcc gggcaagggc 2161 aaatccacca tgaagaagtc tttcagagtg aaaaagtaaa ttttatagga aaaaagggta 2221 tcatgatgaa attcaaaatc ttattttcta aggtcagtgt gcatttgttt agttttgatg 2281 cttttcaaat tacattattt tcctccccta tgaacattgt ggggagggac tctaaataaa 2341 ccagtttagg catttgctag ctttaggtgc ttttattggt gcctgccctt ttccttgttc 2401 attttaattt ctgcaataat cctggacttt cctaaactat gtaatgtata cttgtccttt 2461 ttctctgcct cccccaaccc cctgttgttt ttatggtcag ctttgccttt tttttttctt 2521 ccaattttat ctaaacagtt gcagagattt ttatatttgt agaaagcatc aagaacggta 2581 tgccagtcag gtcctggaag taaaatggag gcacaatata gcactgactg agttgtaaag 2641 cctcctgcct ggagacttca gttatagctg taataattaa tcttatttat aaaagccact 2701 ccactaacct tttctctcca actgtaaaca cagagacagc tttgggaata agccaaaaac 2761 agggtgatct cattagattt tgaagatata tgactccttt gggctacatt tcatattgat 2821 caatttctag gtatttttca ctggcccaaa gtattgcatt cccttaacag caagcacaag 2881 ttctctatat cacttgtttt ttgttgttgt tgttgttgtc gtcgttgttt tgagacggag 2941 tcttgctcag gtgccccgga gtgcagtggt gcaatctcag ctcactgcaa cctccacctc 3001 ctgggttcaa gcaattctcc tgcttcagcc tcccgagtag ctgggattac aggtgtgtac 3061 caccacgcct ggcaattttt ttgtattttt agtagagatg gggtttcgcc gtgttggtca 3121 ggctggtctc gaactcctga cctcaggtga tccgcctgcc tcggcctccc aaagtgctgg 3181 gattacagga gtgagccact gtgcctggcc tatcccactt ggtttttgac tgaaggggaa 3241 gtgtagaaat gtattgattt gtgatttctg gtgtcacctg tgttaccaaa aatcaaaaca 3301 aatctttttt attttttatt attattatta tttttgagac agagtctcgc tctgtcgccc 3361 agtgtggagt gcagtggtgt gatcttggct cactgcaaac tccgcctccc aggttcaagc 3421 gattctccca cctcagcctc ctgagttggg tcctacaggc gcacacgacc acgcccagct 3481 aattttttgt atttttagta gagttggggt ttcaccatgt tagccaggat ggtctcgatc 3541 tcctgacctc gtgatccact cacctcagcc tcccaaaatc ctggggttac agatgtgagc 3601 taccactcac ggcccaaatc ttcttgatca tatgtttaaa tatatttttt aatatttgga 3661 gcatgagttg tcacttcttg tttgcctttt ttataaggaa atgttggaga gttacatcat 3721 tgctaatgta gaaatgttaa gtggaaaaat atacagtttg gtaaaataaa ctagattcta 3781 catttatttg tgggtttttt tcccctcctt tctttccaca gcacttttga tatcaagcaa 3841 gtggcttcct ttttgagata ttaaaaaaaa aaagaaaagg aaaaaagtaa atgaagccca 3901 actacctaac cctttcttat ttgtatttgt tttagtattg tgaagttgtg ttaaatagta 3961 ctagctagaa atacaaattt ctggttatca tttctcttcc ctgtggcact tgacatttta 4021 attgtcttaa agtttttgaa gtacatcttc tggccccttg agtactgcca gaggcaaaag 4081 atgtttgttt cttattcatt ccacttttgt ctcctgggat cccttctgta gcctaaagta 4141 tggctgggaa atggacttga gaagattggc ttgaattaga tcataatcat gtgtgatccc 4201 atcatgaatt cattggaatt tgtgttgcat gtaaggcaat ctttcctgtt gtaaatcttc 4261 cttttttaat gtacatatat tttgaaaaat atgaataaac atgaaatttt aaaaaaaaaa 4321 aaaaaaaa //