LOCUS BC053322 2178 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens deformed epidermal autoregulatory factor 1
(Drosophila), mRNA (cDNA clone MGC:59746 IMAGE:6584290), complete
cds.
ACCESSION BC053322
VERSION BC053322.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2178)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2178)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016944.
FEATURES Location/Qualifiers
source 1..2178
/db_xref="H-InvDB:HIT000053872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59746 IMAGE:6584290"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2178
/gene="DEAF1"
/gene_synonym="NUDR"
/gene_synonym="SPN"
/gene_synonym="ZMYND5"
/db_xref="GeneID:10522"
/db_xref="HGNC:HGNC:14677"
/db_xref="MIM:602635"
CDS 116..1813
/gene="DEAF1"
/gene_synonym="NUDR"
/gene_synonym="SPN"
/gene_synonym="ZMYND5"
/codon_start=1
/product="deformed epidermal autoregulatory factor 1
(Drosophila)"
/protein_id="AAH53322.1"
/db_xref="GeneID:10522"
/db_xref="HGNC:HGNC:14677"
/db_xref="MIM:602635"
/translation="MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSR
DEDSEEDADSEAERETPRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVT
VANVGAAADNVFTTSVANAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVET
TGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNR
LGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHA
ASCTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFT
VTPSGQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCRASHPEP
HYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEP
RSWLYLEEMVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCG
REAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV"
BASE COUNT 491 a 669 c 678 g 340 t
ORIGIN
1 cttcgggcgg cctcggccca gctcgggcgt cctcttcggg ccccgcttcg ggctccgcga
61 ccggcgcttc gggcggtccc ggacggcgcc ttcgggaagg ctcggcggag tccggatgga
121 ggactcggac tcggcggcaa agcagctggg cctggctgag gcggcggcgg tggcggccgc
181 ggccgctgtg gcggcggcgg ccgcggccgc ggcaggaggc gaggcggagg agccggtgct
241 gagcagggac gaggactcgg aggaggacgc agactcggag gcggagcggg agacgccgcg
301 ggtcacggca gtggcggtga tggcggcgga gcccgggcac atggacatgg gcgccgaggc
361 cctgcccggc cccgacgagg ccgccgctgc cgcagccttc gcagaggtga ccacagtgac
421 agtggccaac gtgggggctg ctgcagacaa tgtcttcacc acgtctgtgg cgaacgcggc
481 atccatctca ggacatgttc tgtctggtag gacggccctt cagatcgggg acagcctgaa
541 caccgaaaaa gcgacactga ttgtcgtcca cacagatggg agcatcgtgg agaccaccgg
601 gctgaaaggc ccggcagctc ccctcacccc aggtcctcag tctcctccaa cccctctggc
661 tcccggccaa gaaaaaggtg gaactaaata caactgggac ccttctgtgt acgacagtga
721 gctgcccgta cggtgccgga acatcagcgg cactctgtac aagaacaggc tcggctcagg
781 cggccgggga cggtgcatca agcaggggga gaactggtac agtcccaccg agtttgaggc
841 catggcagga agagccagca gtaaggactg gaaaagaagc attcgctacg cgggccgacc
901 cttgcagtgc ctcatccagg atgggatctt aaaccctcac gctgcctctt gcacctgtgc
961 tgcctgctgc gacgacatga ccttaagtgg cccagtcagg ctttttgtgc cttacaaaag
1021 gcgcaagaag gagaatgaac tgcccacaac tcccgtgaag aaggactccc ccaagaacat
1081 cacattgctt ccagccaccg cggctaccac cttcaccgtg accccctcgg gacagatcac
1141 gacctcgggg gcactgacct ttgaccgagc gtccacggta gaggccactg ctgtcatatc
1201 agagagtccg gcccagggcg acgtcttcgc aggggccaca gtccaagagg ccagcgtgca
1261 gcccccatgc agggccagcc accctgagcc tcactacccc ggctatcagg acagctgcca
1321 gatcgcaccg tttccagaag ctgcgttgcc aacgtcacat cccaaaatag tgttgacatc
1381 cctgcctgcg ctggcggtcc cacccccgac tcccaccaaa gcggcacctc ccgcgttggt
1441 caatgggctg gagctgtcag agccgcggag ctggctgtac ctagaagaga tggtcaactc
1501 cttgctcaac acagcgcagc agctgaagac gctgtttgag caagccaagc atgccagcac
1561 ctaccgagaa gctgccacaa accaggccaa gatccacgct gacgcagagc ggaaggagca
1621 gtcctgcgtt aactgcggcc gggaggctat gagcgagtgc accggctgcc acaaggtcaa
1681 ctactgctcc accttctgcc aacgcaagga ctggaaggat caccagcaca tatgcggcca
1741 gtcagcagct gtcaccgtcc aggcagacga agtccacgtg gctgaaagcg tgatggagaa
1801 ggtgaccgtg tgaggctcca tcggccgccc tgggagctgg ggcccctcgc actcctgtga
1861 ggcttttgca ggtcgaaggc ccccctgagg actctggggg gacgttgaga agaggggtgt
1921 gggaaggtaa agaaacttgc tggacaagtc attaacacac tttaagcgaa tggtgccctg
1981 ggaagcgcac tccccctgcc cgggccccct gcccgctcgc ggacagattt tttatccctg
2041 ggatcatgag cgtccggtct tgcccacagg gcctgtgctg cgacgcacat acatacgtgt
2101 tgtgtctgtc aataaagtgt aaataaggtc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaa
//