LOCUS BC053321 1748 bp mRNA linear HUM 18-MAY-2004 DEFINITION Homo sapiens protein kinase C, alpha, mRNA (cDNA clone IMAGE:6538304), partial cds. ACCESSION BC053321 VERSION BC053321.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1748) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1748) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: m Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4506066. FEATURES Location/Qualifiers source 1..1748 /db_xref="H-InvDB:HIT000259247" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6538304" /tissue_type="Lung, epidermoid carcinoma" /clone_lib="NIH_MGC_101" /lab_host="DH10B" /note="Vector: pOTB7" gene <1..1748 /gene="PRKCA" /gene_synonym="PKC-alpha" /gene_synonym="PKCA" /gene_synonym="PRKACA" /db_xref="GeneID:5578" /db_xref="MIM:176960" CDS <1..1143 /gene="PRKCA" /gene_synonym="PKC-alpha" /gene_synonym="PKCA" /gene_synonym="PRKACA" /codon_start=1 /product="PRKCA protein" /protein_id="AAH53321.1" /db_xref="GeneID:5578" /db_xref="MIM:176960" /translation="ASQRLRLPLPLRAAPARLSPAPAAPPRRDLGHRPAPRARGRPEP APLPRRPRPPGPPRPQLPGGGKRWLGGTMADVFPGNDSTASQDVANRFARKGALRQKN VHEVKDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPG ADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN VPSLCGMDHTEKRGRIYLKAEVADEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDP KNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFG VSELMKMPASGWYKLLNQEEGEYYNVPIPEGDEEGNMELRQKFEWR" BASE COUNT 475 a 472 c 446 g 355 t ORIGIN 1 gcgagccagc ggctccggct cccgctcccg ctccgcgcag caccagcccg actctccccg 61 gcccccgccg cgccccctcg ccgcgacctc ggccaccggc ccgcgccccg cgcccggggt 121 cgccccgagc ccgcacctct cccccgccgc ccccgcccac ccggccctcc gcggccgcag 181 ctccccggcg gaggcaagag gtggttgggg gggaccatgg ctgacgtttt cccgggcaac 241 gactccacgg cgtctcagga cgtggccaac cgcttcgccc gcaaaggggc gctgaggcag 301 aagaacgtgc acgaggtgaa ggaccacaaa ttcatcgcgc gcttcttcaa gcagcccacc 361 ttctgcagcc actgcaccga cttcatctgg gggtttggga aacaaggctt ccagtgccaa 421 gtttgctgtt ttgtggtcca caagaggtgc catgaatttg ttactttttc ttgtccgggt 481 gcggataagg gacccgacac tgatgacccc aggagcaagc acaagttcaa aatccacact 541 tacggaagcc ccaccttctg cgatcactgt gggtcactgc tctatggact tatccatcaa 601 gggatgaaat gtgacacctg cgatatgaac gttcacaagc aatgcgtcat caatgtcccc 661 agcctctgcg gaatggatca cactgagaag agggggcgga tttacctaaa ggctgaggtt 721 gctgatgaaa agctccatgt cacagtacga gatgcaaaaa atctaatccc tatggatcca 781 aacgggcttt cagatcctta tgtgaagctg aaacttattc ctgatcccaa gaatgaaagc 841 aagcaaaaaa ccaaaaccat ccgctccaca ctaaatccgc agtggaatga gtcctttaca 901 ttcaaattga aaccttcaga caaagaccga cgactgtctg tagaaatctg ggactgggat 961 cgaacaacaa ggaatgactt catgggatcc ctttcctttg gagtttcgga gctgatgaag 1021 atgccggcca gtggatggta caagttactt aaccaagaag aaggtgagta ctacaacgta 1081 cccattccgg aaggggacga ggaaggaaac atggaactca ggcagaaatt cgagtggaga 1141 tgataataga gactgccgca taggactgct gggaggattc actcagttca cttacgtcag 1201 gatcatccat atggctgtcc ctcacctctg catcttgtcc cactggaagg tcttcagggg 1261 cagtaataca catggagctg tcatcacccc tgataacaat gccttctgga atacctcctg 1321 aaggctctgc ctaaggctgt tctacagtta acttttgttt taataagtag aaaaaaataa 1381 gacctgatgt ggtggctcat gcctataatc ccagcaagtt tgccaggcca aggcgggtgg 1441 atcacctgag gttaggagtt caagaccagc tgggccaaca tggtgaaacc gcatctctgc 1501 taaaaataca aaaattagcc aggcatggtg gtgagagctt gtggtcccag ctacttggga 1561 ggctgaggca gtagaatcac ttgagcccgg gaggtggagg ttgcagtgag ctgggatcgt 1621 gccattgcat tccagcctgg gtgacagacc gagactccgt ctcaagaaaa aaaaaaaaat 1681 agaaaaaata tactcttaag ataacaataa aaatatagta tagtgaatac aaaaaaaaaa 1741 aaaaaaaa //