LOCUS BC052965 5568 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nucleoporin 153kDa, mRNA (cDNA clone MGC:51910
IMAGE:6067006), complete cds.
ACCESSION BC052965
VERSION BC052965.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5568)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5568)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430145.
FEATURES Location/Qualifiers
source 1..5568
/db_xref="H-InvDB:HIT000053841"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51910 IMAGE:6067006"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5568
/gene="NUP153"
/gene_synonym="HNUP153"
/gene_synonym="N153"
/db_xref="GeneID:9972"
/db_xref="HGNC:HGNC:8062"
/db_xref="MIM:603948"
CDS 67..4494
/gene="NUP153"
/gene_synonym="HNUP153"
/gene_synonym="N153"
/codon_start=1
/product="nucleoporin 153kDa"
/protein_id="AAH52965.1"
/db_xref="GeneID:9972"
/db_xref="HGNC:HGNC:8062"
/db_xref="MIM:603948"
/translation="MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVT
ESVKNIVPGWLQRYFNKNEDVCSCSTDTSEVPRWPENKEDHLVYANEESSNITDGRIT
PEPAVSNTEEPSTTSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGS
SGFSLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSL
SQHTATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQS
KLRNTPYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSS
PLNSPLDRSGIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSFYFKPSLTPSGE
FRKTNQRIDNKCSTGYEKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMR
RERTRFVASKPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQAL
TNKVQMTSPSSTGSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTL
EPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFASPKIDS
VAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQ
AAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAI
KCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWE
CSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWD
CELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGP
SQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEV
KKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVIN
STPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVE
PASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENS
SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPA
TSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLAT
TSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQP
SQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGF
PFNQSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK"
BASE COUNT 1615 a 1225 c 1137 g 1591 t
ORIGIN
1 ggcctccgcc tctgcctctc ccgccccctt acccgccccg gagcgggaag cggcggaggc
61 tccgccatgg cctcgggagc cggaggagtc ggagggggcg gtggcggcaa gatccggacg
121 cggcgttgcc accaggggcc aattaagcct taccagcagg ggcgacaaca gcatcagggc
181 attcttagca gggttacaga atctgttaag aatattgtgc cagggtggct acaaagatac
241 ttcaacaaga atgaagatgt atgcagctgt tcaacagaca caagcgaggt tccacgctgg
301 ccagaaaata aagaggacca tctggtatat gccaatgagg agagctctaa tattactgat
361 gggagaatca cacctgagcc agcagtcagt aatacagaag aaccttcaac aactagtact
421 gcttcaaatt atccagatgt gttaacaagg ccttctcttc atcggagcca tctgaatttt
481 tccatgttgg aatcccctgc attacactgt cagccatcta catcctcggc attcccaatt
541 ggcagttcgg gattttccct tgtaaaggaa attaaagatt ctacctctca gcatgatgat
601 gataacatct caactaccag tggtttttct tcaagagctt ctgataaaga tataactgtt
661 tcaaagaaca cttcattgcc acctctgtgg tccccagaag ctgaacgttc tcactcactc
721 tcacagcaca ctgccaccag ctcaaaaaaa ccagcattca acttgtctgc ctttggaaca
781 ctttcccctt cacttgggaa ttcttcaatc cttaaaacca gtcagcttgg agattctcct
841 ttttatcctg gaaaaacaac atacggtggg gcagcagctg ctgtaagaca gtctaaacta
901 cgaaatacac cttatcaggc accagttaga agacaaatga aagctaagca actcagtgca
961 caatcttacg gtgtgaccag ttcaacagct cggcgaatat tgcagtcttt agagaagatg
1021 tcaagccctt tagcggatgc aaaaagaatt ccatccattg tttcttctcc tctgaattct
1081 cctcttgata ggagtgggat agatatcaca gattttcagg ccaaaagaga aaaggtggat
1141 tctcaatatc ctcctgttca gagacttatg accccaaagc cagtttccat agcaacaaat
1201 cgaagttttt attttaaacc atctctgact ccttctggtg aattcaggaa gactaatcaa
1261 agaatagata acaagtgcag tactggatat gaaaaaaata tgacacccgg acaaaataga
1321 gaacaacgag aaagtggctt ttcatatcca aatttcagtt tgcctgcagc caatggttta
1381 tcttctggag taggtggtgg aggtggcaag atgagacgag aaagaacacg ctttgttgct
1441 tctaaacctc tggaggagga ggaaatggaa gttccagtat taccgaaaat ctctctaccg
1501 atcaccagtt cttcactgcc tacctttaat tttagttccc ctgagatcac aacttcctct
1561 ccatcaccca tcaattcgtc tcaagcatta acaaacaagg tacaaatgac ctctccgagc
1621 agcactggca gtcccatgtt taaattttca tctccaatcg taaaatctac tgaggcaaat
1681 gtactacctc catcatctat tggatttaca tttagtgtgc ctgttgcaaa aacagcagaa
1741 ctttctggtt ctagtagtac tttagaacca attataagta gttcagctca tcatgtcact
1801 acagtgaaca gtacaaattg taagaagaca ccacctgaag attgtgaggg tccttttaga
1861 cctgcagaaa tcctgaaaga aggaagtgtt ctagatattc tgaaaagccc tggtttcgca
1921 tcgccgaaga tagattctgt tgctgctcag cccaccgcaa caagcccagt agtttataca
1981 agaccagcaa taagtagctt ttcttctagt ggaattgggt ttggggagag tttaaaagct
2041 gggtcatcat ggcagtgtga tacatgtcta ctccagaaca aagttacaga caacaaatgc
2101 atagcctgtc aagcagcaaa attgtcaccc agagatactg ctaaacagac tggaattgaa
2161 acaccaaata aaagtggcaa aacaactctt tctgcatcag ggacaggctt tggagacaaa
2221 tttaaaccag tgataggcac ttgggattgt gatacctgtt tagtgcaaaa taaacctgaa
2281 gcaataaaat gtgtagcctg tgaaacaccg aaacctggaa cttgtgtgaa gcgagccctt
2341 acattgacag tggtttcgga aagtgctgag actatgactg cttcatcttc cagctgcact
2401 gtaaccactg gtaccttagg atttggagat aaattcaaaa ggcccattgg atcttgggag
2461 tgttcagtat gctgtgtttc taataatgca gaagacaata agtgtgtgtc ctgtatgtct
2521 gagaaaccag gaagttcagt acctgcttca agtagcagca ctgtacctgt ctctctgcct
2581 tctggaggct ctctaggatt ggaaaagttc aagaaacccg agggaagctg ggactgtgaa
2641 ttgtgcctag tgcagaataa ggcagactct accaaatgtt tggcatgtga aagtgcaaag
2701 ccaggcacaa aatctgggtt taaaggcttt gacacatctt cctcatcttc gaactcagca
2761 gcctcctcat ccttcaaatt tggtgtctca tcatcctctt ctgggccttc tcagacttta
2821 acaagcactg gaaattttaa atttggagat cagggaggat tcaaaatagg tgtgtcatct
2881 gattctgggt ctataaaccc catgagtgaa ggctttaaat tttctaaacc aataggagat
2941 tttaaatttg gagtttcatc tgaatctaag cccgaagaag ttaaaaaaga tagtaagaat
3001 gataatttta agtttggact ttcttctggt ttaagcaacc cagtttcttt aactccattt
3061 caatttgggg tatctaatct tggacaggaa gaaaagaaag aggaactgcc caaatcttcc
3121 tctgcaggtt ttagctttgg tacaggtgtt attaactcca cccctgctcc tgctaacacc
3181 atagtgacct ctgagaacaa gagcagcttc aaccttggaa ccatagaaac caagagtgct
3241 tcagtggctc ctttcacatg taagacatca gaagctaaaa aagaagaaat gcctgccacc
3301 aaaggaggat tctcttttgg caacgtggag cctgcctctc tgccatctgc ctcagtgttt
3361 gttttgggaa ggacagaaga gaaacagcaa gagcctgtca cttctacttc cctagttttt
3421 gggaagaaag ctgacaatga agagccaaag tgtcaaccag tgttttcctt tgggaattca
3481 gagcaaacca aagatgagaa ttcttcaaag tccacattta gttttagtat gacaaaacca
3541 tctgagaagg aatctgaaca gccagcaaaa gccacttttg cctttggagc tcaaactagt
3601 actacagctg atcaaggtgc agcaaagcca gtttttagtt tcttgaacaa cagttcctct
3661 agttcaagta caccagccac ttctgctggt ggtggcatat ttggtagttc cacctcttcc
3721 tccaatccac ctgtggctac ctttgtgttt ggacagtcca gcaatcctgt gagcagctct
3781 gcctttggta acactgctga atccagcacc tctcagtctt tgctattttc tcaagatagc
3841 aaactagcaa ccacatccag cacaggtaca gctgtcaccc catttgtctt tggtccagga
3901 gccagcagta ataatactac cacctctggt ttcggctttg gagccacaac cacatctagc
3961 tctgcaggat cctcctttgt atttggaact ggaccctcag caccatctgc cagtccagca
4021 tttggtgcta accagacccc aacatttgga caaagtcaag gtgccagcca gcccaatccc
4081 ccaggctttg gatctatatc atcttccaca gcattatttc ccactggttc tcagcctgca
4141 ccacctactt ttgggacagt gtcaagcagt agccagcccc ctgtgtttgg acagcaacct
4201 agtcagtctg catttggctc tggaacaact cctaattcta gttcggcttt ccagtttggc
4261 agcagcacta caaatttcaa cttcacaaac aacagtccat caggagtgtt cacatttggt
4321 gcaaattcta gcacacctgc agcctcagcc cagccttcag gctcgggggg ctttccattt
4381 aaccagtctc cagcagcatt tacagtgggg tcaaatggga aaaatgtgtt ctcttcttct
4441 ggaacttcat tctctggtcg caagataaag actgctgtta gacgcaggaa ataaaggtca
4501 cattggtgtt gtactcaatt ttaacaacag ctggtgccct gctttcagat actggattgt
4561 actttgtgct ggggttatct gaagtcagat ctgcctaagg acttctttaa ttttggaatt
4621 ttcctccttt ctctttcgtt acagaagccc caccctgcct cacccaccct tttttaaata
4681 aataaatagc tagactggtg actgattctt cagcaaaaat attttatgat ccagcagatt
4741 attcactgat ttgacatagt ctggctgtac ccaggaatgg agcctgcacg gtgaatggct
4801 ttgtatagaa cctctttgtc tacaccatta tgtgcgctga taagcgttca tggaacgcgt
4861 tgaaattgta attatatctg aggaattctg tatagattag aattctgtat agattagaga
4921 gtgttgaaac ggatgatttc tatgctgagt ttgtgctggt gtatgtgtga agtgagtgag
4981 ttgggtgtat tgtgcgctaa acttttctga tagaggaagc ctgattaaag aatggtccgt
5041 gctaaggact tgttagatct agttcactct ccatttaata attatatgct atttctatat
5101 tttcattctc ctatcacctg tcttgccttt ttcattattt tattatgaaa cttgtgtaaa
5161 tacaattttg tttctgtact ttttggcata acataaatct gtgaacttga aatttgaatt
5221 ttgtgttaga gatttttttg ttgtttgttt agtcttgtct cagattttat tatgtaaatc
5281 ccattattca aagttgccta aatccatttg gaaatcttta aaaaaaaatt ggggattctt
5341 aaagttgaat ttattggctt ttctgatcca gttttgtttg gaccaaaaac cagtattgta
5401 caaagtatta agcatatatt tttatattta ctaaaatgga ctgtggtgac tttggataat
5461 aaggaaaagt ttaatattaa agccatgttt attacagtat aattaacatg ttaaaccatg
5521 ggataaatgc catcaataaa aaattatgac ataaaaaaaa aaaaaaaa
//