LOCUS BC052957 5249 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 84, member B, mRNA
(cDNA clone MGC:48619 IMAGE:5262890), complete cds.
ACCESSION BC052957
VERSION BC052957.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255195.
FEATURES Location/Qualifiers
source 1..5249
/db_xref="H-InvDB:HIT000053837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48619 IMAGE:5262890"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5249
/gene="FAM84B"
/gene_synonym="BCMP101"
/gene_synonym="NSE2"
/db_xref="GeneID:157638"
/db_xref="HGNC:HGNC:24166"
/db_xref="MIM:609483"
CDS 285..1217
/gene="FAM84B"
/gene_synonym="BCMP101"
/gene_synonym="NSE2"
/codon_start=1
/product="family with sequence similarity 84, member B"
/protein_id="AAH52957.1"
/db_xref="GeneID:157638"
/db_xref="HGNC:HGNC:24166"
/db_xref="MIM:609483"
/translation="MGNQVEKLTHLSYKEVPTADPTGVDRDDGPRIGVSYIFSNDDED
VEPQPPPQGPDGGGLPDGGDGPPPPQPQPYDPRLHEVECSVFYRDECIYQKSFAPGSA
ALSTYTPENLLNKCKPGDLVEFVSQAQYPHWAVYVGNFQVVHLHRLEVINSFLTDASQ
GRRGRVVNDLYRYKPLSSSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIG
GELRIGKQPYRLQIQLSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQELATHLHPA
EPEEGDSNVARTTPPPGRPPAPSSEEEDGEAVAH"
BASE COUNT 1292 a 1212 c 1327 g 1418 t
ORIGIN
1 gcgttacgca gccgcggggg aaagacatgc ccctagtctg cccgctgcgc tgccctctgc
61 ccagcctcgc tgccgcccgc gccgggagag gagggactgc cgagcctaca ccttcaaact
121 cgccctagaa gtctcggggc gcggcaggga gcccttcccc aggccccacg gccttcacct
181 ctccgcgggt agcctcagcc cctgtccggg gacctgtgca aatgaccctg gagttggttt
241 cgctttctcc ccttgcggcg gtgtgaacgt gtgtccgcag cgtgatgggc aaccaggtgg
301 agaaattgac ccacctaagt tacaaggaag ttcccacggc cgacccgact ggcgtggacc
361 gggacgacgg gccccgcatt ggggtctcct acattttctc caatgacgat gaggacgtgg
421 agccgcagcc gccgcctcag gggccagatg gcggcggctt gcccgacggt ggggacgggc
481 cgccgccgcc ccagccgcag ccctacgatc cgcggctgca cgaggtggaa tgctccgtgt
541 tctaccggga cgaatgcatc taccagaaga gcttcgcgcc gggctcggcg gcgctgagta
601 cctacacgcc cgagaacctg ctcaacaagt gcaagccggg cgatctggtg gagttcgtgt
661 cgcaggctca gtacccgcac tgggccgtat atgtgggtaa cttccaggtg gtgcacctgc
721 accggctgga ggtgattaac agcttcctga ctgacgccag ccagggccgt cgcggccgcg
781 tggtcaacga tctgtaccgc tacaagccgc taagctccag cgccgtggtg cgcaacgcgc
841 tggcgcacgt gggtgccaag gagcgcgagc tgagctggcg caactcggag agtttcgccg
901 cctggtgccg ctacggcaag cgcgagttca agatcggcgg cgagctgcgc atcggcaagc
961 agccctaccg gctgcagatt cagctgtcgg cgcagcgcag tcacacgctc gagttccaga
1021 gtctagagga cctgatcatg gagaagcgac gcaacgacca gatcgggcgc gcggccgtgc
1081 tgcaggagct cgccacgcac ctgcacccgg cggagccgga ggagggcgac agcaacgtgg
1141 cgcggactac gccgcctccc gggcgccccc ctgcgcccag ctccgaggag gaggacggag
1201 aggcagtggc acactgatgg gcgagctgag cgcagagctg cgaaggggaa ccgtttgcag
1261 tagcagccgc tgctcccttt ctccctctct tcctccctct tttgccactg tctgggcccc
1321 atctgggatt cctgggccct ttggaaaaga gttggtgaaa tgcgcagccg gctgtggacg
1381 ggggaggagg aaggggacag agggagcagg taggaaacac tttagttggg ggtggggggc
1441 gtctccctct ggccccctgt ctgtcttcct ctccgcggtg gagcaaactg tggacttgcc
1501 tggcacttaa accttggtag atctgggttt ataatcggcc attcttaagc acgtggggtt
1561 gggggaaagt tcggagtacc cattcctgcc gttgcttcct atcctgggct tggaagaatc
1621 ctggtagaaa ggccagagtg ggtttgtgga gtcgccactg cgggaccagc acgaaagctg
1681 cttgtctgct ttggcggagc tgagctgtgt atgggatcca ggaggctggg gtgatttatt
1741 ttatgggatt cctggagcgc agggctggtg aatccatgac aaggtccggg agcagcagac
1801 aaaaaccaca gcagcctcct attaagtgta acaaatagtt aagcaaactc gggctacaaa
1861 caaagacttt gctacctccc tcctccacaa cccccaagta attagccttc tggagctggc
1921 tcttagctga ggctcctgct acctcctgct ccacccgccc cttcctaggt tacaagtaaa
1981 tcattgtcaa gggccagcca ggggaaggtt tcaattaagg ttctgttctg ctgcctttgt
2041 ttctcccctg ctgttgtagg cacttacagc tgcgttgtta tgaaaggagg gaatagccct
2101 ttgtgtcttt gatctaatta aacctgcttg gctgtgttta tccgcagggc aggtcacaga
2161 tagggttggc tgtgccactc cataaagtat ctattgtgga agcagccaaa aagggctgct
2221 gtggcaggaa ttggttaatt tctccttcca cttcccttcc tgaatagtga agggagccct
2281 tttaaaacaa ggctttggtg gtaatcctgt gatttttttt tctcccccat cccctcactg
2341 gcccatccct ctcaccctca cttttgttct gctggtgggt aaaatcttag gctgaacaca
2401 tatttcaatg gtaagatact tattttgcta tccacacttg atgcaattga attcaaggtg
2461 caaagtcttg tactgaagca gtctccttgt tgcttggaga acacctcctt cagagccctt
2521 tgttaaataa gaggggcgac gttgatcata gatgccacct ggttagcacc gaatctgact
2581 ttggtgacag tcctaaagca cagttggtga ttgtgagatc tgttagcggc aggctgagca
2641 gatactactt ggttttgctt ggtatgagat actactgttt gcttagtatg agattttttc
2701 cagcctgtct cttaaactcc tgtgacatct tcaatgatat gtgccctcag ttgcagcata
2761 gcttctctgc tgcctattgc cattgctgtc tcaaaagttg agtgaatttt gaggcgtctt
2821 tttttttttt tcctctcttg ggagtcgttg taaactactg tgtacaagtc attttgtgat
2881 atgattctga acagttggaa tagaatcata gttaagtggt acagccatgg ctatcgtcag
2941 gcctgttgcc tggagatctc taagttaagg caacaagact taaagaattt tctaatacac
3001 ttgtttcaca catggacgtt gaggccatag tctttaaaag cttggacatt tgtagcacct
3061 caacatgaaa gggcattagc tatgtttcct gtttttacag tgatcaccaa acagatcttg
3121 ccactttgat tgttaaaaat gaaccacatt ctagccctgg tctgggactt tggagggaga
3181 tgaatttctt gttggaaatg taaatctagt gtccatattt aatactctca cagctttgtg
3241 tttattctct ttgctcatgg aatagcagaa caagataaac atgggttaag acatttagga
3301 gaacctgctg tatctaaccc agttggattt tctttcatgc ttaacacagt agtgaaaata
3361 gaaggtaggc cgggcacagt ggctcatgcc tgtaatccca gcactttggg aggctgaggc
3421 aggtagatca cctgaagtta ggagttcgag accagcctgg ccaacatggc gaaaccctgt
3481 ctctaccaca aatacagaaa attagctggg cgtggtggca ggcgcctgta atgcctgcta
3541 cttgggagcc tgaggcagaa gaattgcttg aagctgggaa gcagaggttg cagtgagccg
3601 agatcgcacc actgcactcc agcctgggca gcagagcaag tagtaataac caccgtgtag
3661 acaagtggga gggaagaata gaatggcact gtccagctat gggctagcca gatcaactcc
3721 cccacccgtc ttcttcctct gtcccagaat ggaaaatgat gtatggtcag tcacgctgaa
3781 gtatagcagc gactgtgtta agagagagca gtgactctct cttctagaga agaggttttc
3841 aataacaggg cttggaaatg aactagaata ggaaatagat cttttcagat gctgctttcc
3901 catgtaatac aagcgtttct acagggtacc agaggtgtga aatatgtgac acttaagaac
3961 agtgattttt attgggaatt ttcttagggt tattacactt aaagcaacaa ccaactagta
4021 acagctccag gaaaggggaa tgaatcaact cttggttctt tcctgaagac ggcagtgttg
4081 tggataagtg agtttttaat gccctggcag tggctacatt tgacacttta gaaaaaataa
4141 acatatttaa taatttttgt ttccccttag gaataagact gtagaactgt tttgtactgt
4201 gaattacgga tgctctttga aggaaagaaa tatcgattct aatgttcttc agaagtcctg
4261 gcagggataa gcaggacatc gactggaacg tatgctaaat gaaagcagac aaatttctat
4321 tttcttacct gagcaaatat tttattgaaa ctgcttatgt atgtcaaagg agcccacaac
4381 ttcagctaca caactttttg tattgaaaga actcatactt tttgtagctt ttatttcaca
4441 tttaatttaa agtgactttt agcactaaaa tgcctagaag attttactcc agacctataa
4501 ggaaatgttt agtttttatg aaaaatgaca agtcgatggt taaacttctc atgtctttgg
4561 tgctttggcc ctaatagcac tggacaacac cacgaccaca tggaaacata tttttggaag
4621 caaaacttta attttatata acgtatgcta tggagagcta agacaattta aggactactt
4681 gttttctatt ttttttctta ataaaatgga atccactgtg ttgaagactc ttgatatcat
4741 gtgcttgtct aaccattttt tgttttataa attagaataa aatatagttg tgataatggt
4801 catcgaatgg atttgtttgg aaagctacat cttatttgtg aaatgttttt taaatcagag
4861 taactatcaa ctgattcagc tttttgttgt tttgttcttg gctataatac ttgtgactca
4921 tgaagaatta tgttgacaaa caggataaat tccacatgca ttttatttcc cagtgagttg
4981 tataaacttt atttttgttg aaggtcgtat gttaaatcaa tgttacattc ttatatcact
5041 tcttgagaag gaagttccga tttgaaattg tatcatttcc ttcaaaatga agggcagtgc
5101 ttagttaaat aaaagattga tgatatcttt taagccattt cctcttcact atgtcttatt
5161 aaaataaaac ctgtcaagtt cttttcaaaa gatgctatga gcgtttccaa taaaccatct
5221 attagagttc acaaaaaaaa aaaaaaaaa
//