LOCUS BC052946 3619 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens neural cell adhesion molecule 2, mRNA (cDNA clone
MGC:51008 IMAGE:5315109), complete cds.
ACCESSION BC052946
VERSION BC052946.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3619)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3619)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33519480.
FEATURES Location/Qualifiers
source 1..3619
/db_xref="H-InvDB:HIT000053834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51008 IMAGE:5315109"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3619
/gene="NCAM2"
/gene_synonym="MGC51008"
/gene_synonym="NCAM21"
/db_xref="GeneID:4685"
/db_xref="HGNC:HGNC:7657"
/db_xref="MIM:602040"
CDS 250..2763
/gene="NCAM2"
/gene_synonym="MGC51008"
/gene_synonym="NCAM21"
/codon_start=1
/product="neural cell adhesion molecule 2"
/protein_id="AAH52946.1"
/db_xref="GeneID:4685"
/db_xref="HGNC:HGNC:7657"
/db_xref="MIM:602040"
/translation="MSLLLSFYLLGLLVSSGQALLQVTISLSKVELSVGESKFFTCTA
IGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT
QEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISD
NRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSF
NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDG
GPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITW
KRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKS
MYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLK
TYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELS
QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYE
IRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPIL
EYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEF
SMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMC
GKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLT
EPEKLPLKEEDGKEALNPETIEIKVSNDIIQSKEDDSKA"
BASE COUNT 1213 a 682 c 816 g 908 t
ORIGIN
1 gctgccgccg cggcggccgc tgctgctgct gcttctgccg ccgctgccgc cgccgctgcc
61 tggatatagt gcggcaagag cggagcttgc agtcactttg cgaggaggag cgcgcgggct
121 gcgggcggct ggggcaccgc gggagcggcg gcggcggctc tagcagaggc ggccggggca
181 gcgaaaggtt ctctctccag ggctggactt aataactttg aaactgtcca ccggtgtcac
241 gtcctgaaca tgagcctcct cctctccttc tacctgctgg ggttgcttgt cagtagcggg
301 caagctcttc ttcaagtgac aatttcactt agcaaagtag agcttagtgt tggagaatct
361 aaattcttca catgtacagc gattggtgaa cctgaaagta tagattggta taatcctcaa
421 ggagagaaga taatttcaac acagagggta gtagtgcaaa aggaaggtgt taggtcacgg
481 ttaaccatct acaatgcaaa tatagaagat gcagggatat atcgttgtca agcaacagat
541 gccaaaggac aaacacaaga agctacagta gttttggaaa tttaccaaaa actcactttc
601 agagaagtgg tatctccaca agaattcaaa caaggagaag atgcagaagt ggtttgccga
661 gttagcagtt cacctgcacc tgctgtcagc tggttgtatc ataatgagga agtcaccact
721 atttccgaca atcggttcgc tatgttagca aacaataacc tgcagattct caacatcaat
781 aaaagtgatg aaggtatata cagatgtgaa ggaagagtgg aggccagggg agaaattgac
841 ttccgtgata tcattgttat tgttaatgtg ccgccagcaa tctcaatgcc tcagaaatct
901 tttaatgcca cagcagagag aggagaagaa atgacatttt cctgcagggc ctcaggctct
961 ccagaacccg ccatctcctg gttcaggaat ggcaagctca ttgaagaaaa tgagaagtac
1021 atattgaaag ggagcaatac agaactcact gtcaggaaca taatcaatag tgatggtggt
1081 ccttatgtct gcagggccac aaataaggca ggagaagatg aaaagcaagc tttcctccaa
1141 gtctttgtac agcctcacat aatacagctt aaaaatgaaa ctacatatga gaatggtcaa
1201 gtcacactcg tatgtgatgc ggaaggggag cctattccag aaatcacttg gaaaagagct
1261 gtggatggct tcacgttcac tgaaggcgat aagagcctgg acggccgtat cgaagtcaaa
1321 gggcagcatg gaagctcatc actgcatatt aaagatgtga agttgtcaga ttcagggaga
1381 tatgactgtg aagctgcaag cagaattgga gggcatcaaa agagcatgta ccttgatatt
1441 gaatatgccc ccaagtttat atcaaaccaa acaatttatt actcttggga aggaaatcct
1501 atcaatataa gttgtgatgt gaaatcgaat ccaccagcat caattcactg gagaagagat
1561 aaattagtct tacctgctaa aaacacgacc aatttaaaga cttatagtac aggaagaaag
1621 atgatattag agattgcacc tacatctgac aatgactttg gacgctataa ttgcacagcc
1681 actaatcata taggaacaag atttcaagaa tatattcttg ctttggctga cgtgccatcc
1741 agtccctatg gagtgaagat catagagctg tcgcagacca cggccaaggt ttccttcaac
1801 aaaccggact cccatggagg tgtacctatt catcactatc aggtggatgt caaagaagta
1861 gcgtcagaaa tctggaaaat tgtacgctcc catggagttc aaacaatggt tgttttgaac
1921 aacctggaac caaatacaac ttatgaaatc agggttgcag ctgtaaatgg aaagggacaa
1981 ggagactaca gtaaaataga aatcttccaa acattaccag ttcgtgaacc aagtcctcca
2041 tccatacatg gacagccaag cagtggaaag agctttaaac tcagcatcac caaacaggac
2101 gatggagggg cccctatttt ggaatacatt gtgaaatata gaagtaaaga taaggaagac
2161 caatggctag agaaaaaagt gcaaggaaat aaagaccaca tcattttgga gcatctccag
2221 tggaccatgg ggtatgaagt tcagattaca gctgccaata gattgggata ttctgaaccg
2281 acagtttatg aattcagcat gccaccaaag cccaacatta ttaaagacac gctgtttaat
2341 ggtcttgggc ttggagcagt aattggcctg ggagttgctg cactgctgct aattcttgtg
2401 gtaacagacg tcagctgctt ctttattcgg caatgtgggt tgctgatgtg catcactagg
2461 agaatgtgtg gaaagaaaag tggctccagt ggcaaaagta aagaactcga agaaggaaaa
2521 gctgcatacc tgaaagatgg atcaaaagaa ccaatagtgg agatgagaac agaggatgaa
2581 agagttacta atcacgaaga tgggagccca gtaaatgagc caaatgaaac cacaccactg
2641 acagaacctg aaaaattgcc tttaaaggaa gaagatggga aagaagctct aaatccagaa
2701 actatagaaa ttaaagtttc taacgacatc attcaatcaa aagaagacga cagcaaagca
2761 taacaacaat attacagggg cttgaacaac actacgaaga gtatttggat tgcgtgaccc
2821 tatgaccaaa actattccat tgaccttaat ttcttgggaa acttctagct tggaatagct
2881 tgtacacata tacatatgat caaatactcc tgcccatgat ccattccctt ttgttattgt
2941 tgttgttgtt gctgttgttg ttaattttgt taagaatttc aatatcaaga ctgactggca
3001 ccaacacttt ggtattcaat ttgattctat gactgaagta ctggaattta ttatgtggct
3061 aaagtgctct atttattaag aactatattt aataccacca acaaatatag gggttaagga
3121 aaaaaaacgt gagctacatg tgtaagaagg ccctgcatgt gtatgagtcc tattctgggc
3181 aaatagattc ttaaagtggc tttcaacttc aagatgaagg agcttaataa tggttactca
3241 ttttatcagg ggaatttcag ggaacgtagg cgtcaaagag ccagttatct ttagcagata
3301 ttaaaaattg aaaactttgg agaactcatt tcaagttatg attcagtgca ttttcaacat
3361 tgatttttga tagactgaag tgccagatca aaattgttac ccatttgaaa gaatattagt
3421 tgtatataaa attagattag aaagactttc taaatctcta tctctttata tatgtcctat
3481 tcattcacaa tggattatac aaaaaaaagt gtattgcaag tgaaataata ttgatttctg
3541 ccctcagctt caaataaagt aaattgaaat gggaacaata aaaaaaaaaa aaaaaaaaaa
3601 aaagaaaaaa aaaaaaaaa
//