LOCUS       BC052800                2487 bp    mRNA    linear   HUM 07-OCT-2003
DEFINITION  Homo sapiens protein tyrosine phosphatase, non-receptor type 18
            (brain-derived), mRNA (cDNA clone MGC:59686 IMAGE:5809095),
            complete cds.
ACCESSION   BC052800
VERSION     BC052800.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 47 Row: e Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18375654.
FEATURES             Location/Qualifiers
     source          1..2487
                     /db_xref="H-InvDB:HIT000053825"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:59686 IMAGE:5809095"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_99"
                     /lab_host="DH10B"
                     /note="Vector: pOTB7"
     gene            1..2487
                     /gene="PTPN18"
                     /gene_synonym="BDP1"
                     /db_xref="GeneID:26469"
                     /db_xref="MIM:606587"
     CDS             64..1119
                     /gene="PTPN18"
                     /gene_synonym="BDP1"
                     /codon_start=1
                     /product="PTPN18 protein"
                     /protein_id="AAH52800.1"
                     /db_xref="GeneID:26469"
                     /db_xref="MIM:606587"
                     /translation="MSRSLDSARSFLERLEARGGREGAVLAGEFSKRCERYWAQEQEP
                     LQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPDHMLA
                     MVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKM
                     RKQRPAAVQTEEQYRFLYHTVAQMFCSTLQNASPHYQNIKENCAPLYDDALFLRTPQA
                     LLAIPRPPGGVLRSISVPGSPGHAMADTYAVVQKRGAPAGAGSGTQTGTGTGARSAEE
                     APLYSKVTPRAQRPGAHAEDARGTLPGRVPADQSPAGSGAYEDVAGGAQTGGLGFNLR
                     IGRPKGPRDPPAEWTRV"
     misc_feature    157..618
                     /gene="PTPN18"
                     /gene_synonym="BDP1"
                     /note="PTPc; Region: Protein tyrosine phosphatase,
                     catalytic domain"
                     /db_xref="CDD:smart00194"
BASE COUNT          601 a          740 c          714 g          432 t
ORIGIN      
        1 ccgcggcgtc cacactcgcc gcgcgcgcgg cggccgggct ggaccttgct ggcccgcggc
       61 gccatgagcc gcagcctgga ctcggcgcgg agcttcctgg agcggctgga agcgcggggc
      121 ggccgggagg gggcagtcct cgccggcgag ttcagcaaaa ggtgtgagcg gtactgggcc
      181 caggagcagg agccactgca gactgggctt ttctgcatca ctctgataaa ggagaagtgg
      241 ctgaatgagg acatcatgct caggaccctc aaggtcacat tccagaagga gtcccgttct
      301 gtgtaccagc tacagtatat gtcctggcca gaccgtgggg tccccagcag tcctgaccac
      361 atgctcgcca tggtggagga agcccgtcgc ctccagggat ctggccctga acccctctgt
      421 gtccactgca gtgcgggttg tgggcgaaca ggcgtcctgt gcaccgtgga ttatgtgagg
      481 cagctgctcc tgacccagat gatcccacct gacttcagtc tctttgatgt ggtccttaag
      541 atgaggaagc agcggcctgc ggccgtgcag acagaggagc agtacaggtt cctgtaccac
      601 acggtggctc agatgttctg ctccacactc cagaatgcca gcccccacta ccagaacatc
      661 aaagagaatt gtgccccact ctacgacgat gccctcttcc tccggactcc ccaggcactt
      721 ctcgccatac cccgcccacc aggaggggtc ctcaggagca tctctgtgcc cgggtccccg
      781 ggccacgcca tggctgacac ctacgcggtg gtgcagaagc gcggggctcc agcgggcgcc
      841 gggagtggga cgcagacggg gacggggacg ggggcgcgca gcgcggagga ggcgccgctc
      901 tacagcaagg tgacgccgcg cgcccagcga cccggggcgc acgcggagga cgcgaggggg
      961 acgctgcctg gccgcgttcc tgctgaccaa agtcctgccg gatctggcgc ctacgaggac
     1021 gtggcgggtg gagctcagac cggtgggcta ggtttcaacc tgcgcattgg gaggccgaag
     1081 ggtccccggg acccgcctgc tgagtggacc cgggtgtaag tctaacgcca gttcctgcct
     1141 gttgcctctt gtgagctcgg actgctgatg ccccggtgct gctgagcgcc gtgcgcagaa
     1201 tggaaacagt gggcctggat caaagttaaa gtttctcagg gtgggaaatg tgggggcttt
     1261 gccccaatga ctgtagcatt caaggcttga ggctggagga ggtagctagg gtatagtggc
     1321 tagtgaggct gcacagagca gattcaagaa agaagatcag gaaggggcat gacccctgag
     1381 ttatgaaggg gagaagggac agatgagctt ccggagactg ctctcctcac cacacagcac
     1441 tagtccatcc tcagcacctg agcctccctc acttggacac tcaggggacc acacagagaa
     1501 gtggatggac acttcgccat ccaggcagaa ctaagccagg cataaccaca gccaagcaga
     1561 ttaaccccag gcagaccgat aaaaagacct ccagataggc agacagacag atggaccacc
     1621 aacctggaca gacagccaaa gcttcagaga tacagtccac aggtggacaa agggatcccc
     1681 agccagagag agagagacca gccaacagct tgatagacca gtgcagccag agagaccacc
     1741 aaacacagcc cccaaaagac agacatctct gctagctgga cagccaggtg gaccccctaa
     1801 gttagtcaga ttactagaca gatataaaca gatcccctgc tgaacagata tacagagttc
     1861 tcagacccca cccccaccct caggtgggct ggctggctga cagaccttct ggccagacag
     1921 actcctaacc aaccagatgg actgccagac aggcagacat cagccacatg gaatcctgac
     1981 atcccagcca gccggccaga ctctcatctt gatgtcttga tggatggacc ccagctagtc
     2041 agacatgatc ctccagattg acagacaagt cccccaaatg agtacacatc tccagctatt
     2101 cagacagatg gacccccagc aaatcaggac ctatctaggc agaccccagc cagacccccg
     2161 ccagacagac tcccaaccag actgacccct tgctgttcac acagcctgcc gagtagctgg
     2221 gactacaggt ctaatttttt ttttttttaa gaaatgagtt tttgccatgt tgcccagact
     2281 ggtcttgaac tcccaacctc aagcaatcct cctgcctcag cctcccaaag tgctgagatt
     2341 acaggtgtga gccaccaggc tcagccccct aagatttgaa acactttaaa tggcccatgg
     2401 tagggttcct gctaggataa aacattaagc ggctgttaaa agaaataaaa ggaggacacg
     2461 tctctgtgca aaaaaaaaaa aaaaaaa
//