LOCUS BC052594 1572 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:6574909, containing frame-shift
errors.
ACCESSION BC052594
VERSION BC052594.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1572)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1572)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..1572
/db_xref="H-InvDB:HIT000099532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6574909"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 579 a 266 c 326 g 401 t
ORIGIN
1 ctcaatccct cgcgctcttc ctttccaact tggacccggc agaatggctc ccgcaaagaa
61 gggtggcaag aataaaaggg ccgttctgcc atcaacgagg tggtgacccg agaatacacc
121 atcaacattc acaagcacat ccatggagtg ggcttcaaga agtgtgcccc tcgggcactc
181 aaagagtttc ggaaatttgc catgaaggag atgggaactc cagatgcgcg cattgatatc
241 aggctcaaca aagctgtctg ggccaaagga ataagaatgt cccataccga atccgtgtgc
301 ggctgtcccg aaaacgtaat gaggatgaag attcaccaaa taagctctac actttggtta
361 cctatgtacc tgttgccact tttgaaaatc tacagtcaat gtggatgaga actaatcgct
421 gatcgtcaaa tacatcaaat aaagttataa aattgccttc aaaaaaaaaa agacataggt
481 tctcgttgga tatgtagaaa tcgcagattg aagagtttaa ttatttggct aacaacagtt
541 acagaaatgt atgctacaat gtgtttgaca agtcttaagt aatcttgttg agataacaat
601 ttgtataatt taaattatct gttgaaattg tggttttcag caaaaataga aaaattaagg
661 aacatttcat tccagtgggc acaggagtac agtaaacaga gagactagtg tggtagggaa
721 aatatatact tttttttgta ttattcaaga ctaagaatgt tacaaaatag aagagattac
781 aatgtacaag attgcaaaca gaaggaagat gtgatcaaac aatcaaaaac taattctgtg
841 aaaagaccaa taaaaaagac ttctgacaag cctaattaag ataaacagag atataaagat
901 gtctctttta tttaaccatt taacattatt tttgtctaat atctaagaag taacattggg
961 ataaccacaa atcttggtca tgttgttata gaaaattggg taatagggaa ttgagtttat
1021 ttccctaaag aaaggaatgc taatgaaaag caagataatt ttcctggaag atcttagaaa
1081 aagtccagga atttggagga atcatgtaca acaaaatata tggttaaaga atgattctaa
1141 aaatgagagg ataattgtaa actctgtata aggagaagtt agactcttag ggcctctctc
1201 ctacccaggg tgactatttg caggtgacta atttttccct gtcatagttt aattctcagg
1261 agaaattgac ccagccagca gctgcaggtg aattcaggtg agttgagtga gtatgaggtg
1321 aggcattatg gcctccacta tatcacctgc aaaccctttc tcaggatgcc ctggcaaaca
1381 tgctgcagcc acacaaggaa gaaaccaaga aataggaaga cataagattc aggaaacagg
1441 atttcatata aaagatagag aagtcctagg acaacagctg tgcaagaggt ccagagatca
1501 aatgaccgaa aacagtgtca aaaaaggagg gacatcttgc taatggaaaa aaaaaaaaaa
1561 aaaaaaaaaa aa
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