LOCUS BC052569 5328 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens SMAD family member 6, mRNA (cDNA clone IMAGE:5922640), with apparent retained intron. ACCESSION BC052569 VERSION BC052569.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5328) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5328) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: e Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923322 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..5328 /db_xref="H-InvDB:HIT000053793" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5922640" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_47" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 1020 a 1478 c 1641 g 1189 t ORIGIN 1 gctccctcat gttgtcgccc tgcggcgccc cttcgacgac aggctgtgcg cggtctgcac 61 ggcgctccgc ggcggagctt catgtggggc tgcgacccgc gcagccggcg cctcgctgag 121 ggaacggacc cccggtaacc ggagaccgcc tcccccccac ccctggcgcc aaaggatatc 181 gtatgttcag gtccaaacgc tcggggctgg tgcggcgact ttggcgaagt cgtgtggtcc 241 ccgaccggga ggaaggcggc agcggcggcg gcggtggcgg cgacgaggat gggagcttgg 301 gcagccgagc tgagccggcc ccgcgggcaa gagagggcgg aggctgcggc cgctccgaag 361 tccgcccggt agccccgcgg cggccccggg acgcagtggg acagcgaggc gcccagggcg 421 cggggaggcg ccggcgcgca gggggccccc cgaggcccat gtcggagcca ggggccggcg 481 ctgggagctc cctgctggac gtggcggagc cgggaggccc gggctggctg cccgagagtg 541 actgcgagac ggtgacctgc tgtctctttt cggagcggga cgccgccggc gcgccccggg 601 acgccagcga ccccctggcc ggggcggccc tggagccggc gggcggcggg cggagtcgcg 661 aagcgcgctc gcggctgctg ctgctggagc aggaactcaa aaccgtcacg tactcgctgc 721 tgaagcggct caaggagcgc tcgctggaca cgctgctgga ggcggtggag tcccgcggcg 781 gcgtgccggg cggctgcgtg ctggtgccgc gcgccgacct ccgcctgggc ggccagcccg 841 cgccgccgca gctgctgctc ggccgcctct ttcgctggcc cgacctgcag cacgccgtgg 901 agctgaagcc cctgtgcggc tgccacagct tcgccgccgc cgccgacggc cctaccgtgt 961 gctgcaaccc ctaccacttc agccggctct gcgggcccgg tgagcgcgct gcgccggccg 1021 ggggggcccc gggtccccgt ccccatcccc ttccgtgccc ttctctctgt gacactgcgg 1081 gtcggcgcag ctgcgggtgc tcccccgggt gcccttggag cgtgggagcc accaggggag 1141 gcgcctcaga ccggccgagg ggagtgggtg tcccagcaca cacatcaagt ggcaacttta 1201 tctcaaggct ccggtaaact taaaagggta catgtcgtag ttttctctgt gcagtttcag 1261 ggacatgatg taggctccaa cttcataggc agtgaaaggg gagggcaggc caaggagaga 1321 ccaaagaagt aggtgctatt tcctcctacc tcaattccgg aatctacccc agtctgtgcc 1381 caggcttcta gcatttgtat gcacgtgccc ttacccacac tgtgcttttc tatgtccaag 1441 tagctgtaag ttgtgaaatt gggtgtacac aaatcatagc tagaatcaaa agtgttcgtc 1501 aaatgtccaa tttgtgcctt tgcatacttt cgacaaagct ttgcagggta acccctctct 1561 ggagtaaaga gcaccctctt tattccccac ataatatcat tccccacatc ccttgggtgt 1621 caagtgccag ggtcttccat agtccttctc aagttttgtg ttcagctttt gtgtagagtt 1681 tagggtcttg gaggcatccg tgagtagatg aagaagccag atactggatt acctctgaga 1741 actgcccccc ttctttgttc tcctcttggg atttcctgca cacgccccac cctcagcctt 1801 gcttacctgg ccaggccctg gtgctcaggt gcagacaggc agaggcccca gcaggtcagg 1861 aggctccagc aggccaggag cttgcagctg ccttgctctg acctctgtct tgtggggaac 1921 acacacttta gcctgtagct agcctctgag ggatgtatgg gaatccatta gctggcactg 1981 gggttttgca ggggtgggac tggcagggag tcacaggctc ttgagcctgg gagggctctg 2041 aatccctcca ttctggcttc cctggggaga gtcagcaccc aggctgggag cacagagagg 2101 gtcaggttgt aggtctcctg actctgtgtg gaaggggaaa gtgggtctag gatggtgcat 2161 ttgtcctagg tgttttgttt gcgtgtggag tagtgtctgg agaggaaagg aagtttcccc 2221 tcagtgatga ttcctgcata gagggcattg atgggggcgg gtggggaggg gaagtgttga 2281 tgaggcaccc tactcccctc atggtcactc cagtcccaat ttaggagcta tgagcagccc 2341 ctgatatgtg gctcatgcca ggctttctat gtactctttt ccccttactg acagctttcc 2401 ctggaagtga ctttctcccc tctgccaact atgactcccc actgcctctg gggaaggaga 2461 ccagtattta tggttgtctt gttcctggtg attttttttt ttttaaagta ggtcccttcc 2521 actctcgtag aagcccctgg caggtgtatt ctctttcgcc acttcagtgt gcagcagatg 2581 tttgttgagc aattactttg ggccaggcac tgtgctgggt gctgtggcta acagagtgga 2641 aatatgagta ggatctgtgc cctcaagaaa cataatccca ccagggattt atgggggaga 2701 gatgggggaa gaagggaagt gtgcagggcc aggtcattgg gtgtgaacta ccagaaggct 2761 gtgggtgtgt atgtaatagg atggcatgca ggagctccac agctccaacc tggagccgga 2821 ccttggagga tgggtcagag gagagggagc cagccgggtc agaggagagg gagccagcca 2881 gctcagagtc aaggtgccag gcacgttcag gtggttgggc agggagggga ggagtgaaaa 2941 agttggagac gatggacagg accactcctg ctactactcc tgggactagg agttggcttg 3001 ggtgttggtt tgcatttggt aggtttggag aggtacaggt caagagatac ctggcaagct 3061 gcagtagaac agttcttgac catggacctg gtcccaggct ctgcccagct agtaacgtgc 3121 agcttgactt tggatgagtt acctcccttc tcagccaccg tgctggtcag tgggggtggc 3181 tctaggaata ttctccccat ctaaatctgg actaagcctt gggacttgat tcccctcctt 3241 ctcccagaag gaggcgctgt tgccagggct gcagcacccc aagtctcctc ccttttcttt 3301 gctagctgct agcctgtggg gcccccattc agccaccctg gggacagctg ggaggaccga 3361 tggtccggga agagtttcca gtatgtgcca ggttggctag cctgtggggc ccccattcag 3421 ccaccctggg gacagctggg aggaccgatg gtccgggaag agtttccagt atgtgccagg 3481 ttgaccctct tgcccctggc ctgagagctg gggtagccct gggctgccca cctgcctcca 3541 ccgcttggcc gccagcctgg ctcccgtaac tgggcgggcg catagctggg gctcagcggt 3601 gcgcgtcctg ataaggagac tgcgccttcc agggctctgg gaagagggcc ggggcaccgg 3661 gcagacagat gcgcgcacac acatagcgca ggcacaccgc tagcgagcaa agtacactgg 3721 aacaccggca ctgagggact cccacctggc agcagtcacc tccgcacctt taccgaccac 3781 tgcagggagc cccggtgaca gaagacccct tcctgggcag tgtggacccc tgctattcag 3841 agcccactct ccatcaactt gagttgtggc cttggggcta gtttcctctt tgggcttctt 3901 ttcctatatc taaagtaaag ggttggaggg aatctgcaca atctgagggc tgatgtgcag 3961 attccaggcc acacaggcct ccgtcccctc ccccactctg ccccaggctt gtctcggaaa 4021 ctggggtcct caggagggga cccacctctt ctgggcatgg gctaggggcc tcctggcctc 4081 ccagcccgtg ggagtcaggc ccaactctgc ctcccccttg ggtgtctttc tgtcccagga 4141 aaagccagtt cgctgagctc ggtgggtgcc tatgtggacg gaaatgtgga gaaatacttt 4201 aatcacagct ctaacctgtg tttatagagc tcctttctcc tgaaagtatc cattaacttc 4261 ggaataaatc tcctgctctt tgcttcccca cttttttttt tttctgtaat tatattcagt 4321 aaattactat tatccaaatt gcgcccgggg aagagagaca gagcgagaga gagagaactt 4381 ctaaacgact ggaggaggcc gcctaggaaa acacagggtt cccaggccag gactatagga 4441 attagaatgg gctagaaagt tttcctttta tttggcctgg cattatccct ttgaaatgag 4501 atcagtttca agttgggctt ccaagccccc gccctgcccg gctcagcggc ccctagccct 4561 gcttgtctgc tcctcctagc tcctcctgga ggtgaggaag gggtgataat gtgcagtttg 4621 cctcttgctg gcgccagccg gccgcgctgt ttatctggct gccaggggaa tctgggcaat 4681 taggctcagg cggccttaaa gtgccaggag ctccttttct gcgtctccca tcatggggct 4741 tagggttgag tcttcaggtt ctgggggcag gaaggacggg cactcaggag gccacctccg 4801 catccacagc ccctctttgg gaggggggaa acttggcaac ccgggaggca tgtggatctt 4861 ttcctaagca agatgctgag ctggaaagat gggggtgtaa ggtaatgtcc caaactgaaa 4921 ctttgccagg cactgggaga ggctgtgaac tcttttctgg ctttagaatt taggtctaga 4981 tcccaaaagg ctaagtaccc cctgggggct aaccagaggc atgcctgggc tgagctgaac 5041 cttctggtgc actggcccct ggctgactgc tcttctgcag gaagttggag gagattcctg 5101 aagttgattc ctcaggctgg atgtccaagg gggttggagt ttctgatgtc tttctgtctc 5161 cctctctttt ctttctctcc ctaccaggtc cacttctttc agaggggcct gcggtgctct 5221 aaaagttctc ctgttaaagt ttagagcaaa ttggttatta ttttaaaatc aataaaactt 5281 ttaaaagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //