LOCUS BC052566 3059 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 IMAGE:6339405),
complete cds.
ACCESSION BC052566
VERSION BC052566.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: k Column: 17.
FEATURES Location/Qualifiers
source 1..3059
/db_xref="H-InvDB:HIT000053791"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59687 IMAGE:6339405"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3059
/gene="TBX2"
/gene_synonym="FLJ10169"
/db_xref="GeneID:6909"
/db_xref="HGNC:HGNC:11597"
/db_xref="MIM:600747"
CDS 312..2420
/gene="TBX2"
/gene_synonym="FLJ10169"
/codon_start=1
/product="T-box 2"
/protein_id="AAH52566.1"
/db_xref="GeneID:6909"
/db_xref="HGNC:HGNC:11597"
/db_xref="MIM:600747"
/translation="MAYHPFHAPRPADFPMSAFLAAAQPSFFPALALPPGALAKPLPD
PGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAK
ELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNS
RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMH
KYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFR
DTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPL
RLHRARAEEKSCAADSDPEPERLSEERAGAPLGRSPAPDSASPTRLTEPERARERRSP
ERGKEPAESGGDGPFGLRSLEKERAEARRKDEGRKEAAEGKEQGLAPLVVQTDSASPL
GAGHLPGLAFSSHLHGQQFFGPLGAGQPLFLHPGQFTMGPGAFSAMGMGHLLASVAGG
GNGGGGGPGTAAGLDAGGLGPAASAASTAAPFPFHLSQHMLASQGIPMPTFGGLFPYP
YTYMAAAAAAASALPATSAAAAAAAAAGSLSRSPFLGSARPRLRFSPYQIPVTIPPST
SLLTTGLASEGSKAAGGNSREPSPLPELALRKVGAPSRGALSPSGSAKEAANELQSIQ
RLVSGLESQRALSPGRESPK"
BASE COUNT 569 a 1067 c 995 g 428 t
ORIGIN
1 cagagatcac gacaagatct aaccagtcgc gcgtggtccc cggcgccgga gcgggccagc
61 tcagcccggc ccagcccggc cccgcgcaga gcccccgccg cccccgcgca cagagccggg
121 tgccccttgc ggtgcgccgg acgggaagcc ccgaggagca gctgctgcgc ccgccacccg
181 ggtcgtccgt ccaccgcgcg cgccgccgcc cgggccgggg gtccgagccg cgcgcccccg
241 gccccggccc cggcccccgg gcgcctgggc cggatgtccc gatgagagag ccggcgctgg
301 cggccagcgc catggcttac cacccgttcc acgcgccacg gcccgccgac ttccccatgt
361 ccgcctttct ggcggcggcg cagccctcct tcttcccggc actcgcgctg ccgcccggcg
421 cgctggccaa gccgctgccc gacccgggcc tggcgggggc ggcggccgcg gcggcggcgg
481 cggcagcagc ggccgaggcg gggctgcacg tctcggcact gggcccgcac ccgcccgccg
541 cgcatctgcg ctccctcaag agcctggagc ccgaggacga ggtggaggac gaccccaagg
601 tgacgctgga ggccaaggag ctgtgggacc agttccacaa gctaggcacg gagatggtca
661 tcaccaagtc cgggaggcgg atgttccccc ccttcaaggt gcgagtcagc ggcctggaca
721 agaaggccaa gtatatcctg ctgatggaca ttgtagccgc tgacgattgc cgctataagt
781 tccacaactc gcgctggatg gtggcgggca aggccgaccc tgagatgccc aaacgcatgt
841 acatccaccc agacagccca gccacggggg agcagtggat ggctaagcct gtggccttcc
901 acaagctgaa gctgaccaac aacatctctg acaagcacgg cttcaccatc ctaaactcca
961 tgcacaagta ccagccgcgc ttccacatag tgcgagccaa cgacatcctg aagctgcctt
1021 acagcacctt ccgcacctac gtgttcccgg agaccgactt catcgccgtc actgcctacc
1081 agaatgacaa gatcacacag ctgaagatcg acaacaaccc gtttgccaag ggcttccggg
1141 acaccgggaa cggccggcgg gagaaaagga agcagctgac gctgccgtct ctacgcttgt
1201 acgaggagca ctgcaaaccc gagcgcgatg gcgcggagtc agacgcctcg tcgtgcgacc
1261 ctccccccgc gcgggaacca cccacctccc cgggcgcagc gcccagtccg ctgcgcctgc
1321 accgggcccg agctgaggag aagtcgtgcg ccgcggacag cgacccggag cctgagcggt
1381 tgagcgagga gcgtgcgggg gcgccgctag gccgcagccc ggctccagac agcgccagcc
1441 ccactcgctt gaccgaaccc gagcgcgccc gggagcggcg tagtcccgag aggggcaagg
1501 agccggccga gagcggcggg gacggcccgt tcggcctgag gagcctggag aaggagcgcg
1561 ccgaagctcg gaggaaggac gaggggcgca aggaggcggc cgagggcaag gagcagggcc
1621 tggcgccgct ggtggtgcag acagacagtg cgtcccccct gggcgccgga cacctgcccg
1681 gcctggcctt ttccagccac ttgcacgggc agcagttctt tgggccgctg ggagccggcc
1741 agccgctctt cctgcaccct ggacagttca ccatgggccc tggcgccttc tccgccatgg
1801 gcatgggtca cctactggcc tcggtggcag gcggcggcaa cggcggaggt ggcgggcctg
1861 ggaccgccgc ggggctggac gcaggcgggc tgggtcccgc ggccagcgca gcaagcaccg
1921 ccgcgccctt cccgttccac ctctcccagc acatgctggc atctcaggga attccaatgc
1981 ccactttcgg aggcctcttc ccctacccct acacctacat ggcagcagca gccgcagccg
2041 cctcggcttt gcccgccact agtgctgcag ctgccgccgc cgcagccgcc ggctccctct
2101 cccggagtcc cttcctgggc agtgcccggc cccgactgcg tttcagcccc tatcagatcc
2161 cggtcaccat cccgcctagc actagcctcc tcaccaccgg gctggcctct gagggctcca
2221 aggccgctgg tggaaacagc cgggagccta gccccctgcc cgagctggct ctccgcaaag
2281 taggggcccc atcccgcggt gccctgtcgc ccagtggctc ggccaaggag gcggccaatg
2341 aactgcagag catccagaga ctggtgagtg ggctggagag ccagcgagcc ctctccccag
2401 gccgggagtc gcccaagtga ggggctgccc agctgctccc ctgccacgca ggccacccgg
2461 gctgcctgcc cctgctgctt gggacgtgta cagcacagaa tgagtattta tttaaataaa
2521 ggagaaaagt gggctgcagc agccggaata gagcctcgtc tggcaagtcg gggcctggga
2581 cacttccctg ggcctcaaca aggatcaggc tgctggaaac acagtcactt gggagctgct
2641 gggctaggtc cagatccgct ccagcgtcaa ggtggcatcc gaaggtgtct ctggtcttcc
2701 agcgaggtgg gagaggcctc atccagggcc cagcggtccc tgcagaagcc agaaggtgca
2761 ggggccaggg gtgggagcat cggagggagt cccagagccc tggaccttgg gcctagaccg
2821 cgtgataaaa ctgggttgag ggatgctgga accagttacg actgaagtca gtgtagacct
2881 gagctgggag ggaacctgtt agtctcccca cctcttccct gaagagacag gcacccctcc
2941 cagccgtggt caacggaggg agtggcactt ctgccttgag tccccagggg aaaaaaaaaa
3001 aaagatattt atgaaataaa tggtaatttg tgtaaataag aaaaaaaaaa aaaaaaaaa
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