LOCUS BC052257 2399 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GC-rich promoter binding protein 1-like 1, mRNA (cDNA
clone MGC:59658 IMAGE:6297561), complete cds.
ACCESSION BC052257
VERSION BC052257.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255032.
FEATURES Location/Qualifiers
source 1..2399
/db_xref="H-InvDB:HIT000053757"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59658 IMAGE:6297561"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2399
/gene="GPBP1L1"
/gene_synonym="RP11-767N6.1"
/gene_synonym="SP192"
/db_xref="GeneID:60313"
/db_xref="HGNC:HGNC:28843"
CDS 10..1434
/gene="GPBP1L1"
/gene_synonym="RP11-767N6.1"
/gene_synonym="SP192"
/codon_start=1
/product="GC-rich promoter binding protein 1-like 1"
/protein_id="AAH52257.1"
/db_xref="GeneID:60313"
/db_xref="HGNC:HGNC:28843"
/translation="MAQHDFVPAWLNFSTPQSAKSPTATFEKHGEHLPRGEGRFGVSR
RRHNSSDGFFNNGPLRTAGDSWHQPSLFRHDSVDSGVSKGAYAGITGNPSGWHSSSRG
HDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPMEIREEKKEDKVEKLQFEEEDFP
SLNPEAGKQHQPCRPIGTPSGVWENPPSAKQPSKMLVIKKVSKEDPAAAFSAAFTSPG
SHHANGNKLSSVVPSVYKNLVPKPVPPPSKPNAWKANRMEHKSGSLSSSRESAFTSPI
SVTKPVVLASGAALSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRN
GDFSENRDCDKLEDLEDNSTPEPKENGEEGCHQNGLALPVVEEGEVLSHSLEAEHRLL
KAMGWQEYPENDENCLPLTEDELKEFHMKTEQLRRNGFGKNGFLQSRSSSLFSPWRST
CKAEFEDSDTETSSSETSDDDAWK"
BASE COUNT 703 a 490 c 546 g 660 t
ORIGIN
1 tggacctaaa tggcgcagca tgattttgtt cctgcttggc taaatttctc aacaccacag
61 tcagctaagt cacctactgc caccttcgaa aaacacggag agcacctacc cagaggagaa
121 ggtagatttg gagtaagccg ccgtcgacat aattcctctg atggtttttt taacaatggt
181 cccctacgaa ctgcaggaga ttcttggcac cagccctccc tgttccgcca tgattctgtg
241 gactctggtg tctctaaggg agcatatgct ggaatcacag ggaacccatc tggttggcat
301 agctcttccc gaggtcatga tggcatgagc caacgtagtg gaggtggcac agggaaccat
361 cgccattgga atggcagctt ccactcccgg aaagggtgtg cttttcagga aaagccacct
421 atggagatta gggaagaaaa gaaagaagac aaggtggaaa agttgcagtt tgaagaggag
481 gactttcctt ccttgaatcc agaagctggc aaacagcatc agccatgcag acctattggg
541 acaccttctg gagtatggga aaacccgcct agtgccaagc aaccctccaa gatgctagtt
601 atcaaaaaag tttccaaaga ggatcctgct gctgccttct ctgctgcatt cacctcacca
661 ggatctcacc atgcaaatgg gaacaaattg tcatccgtgg ttccaagtgt ctataagaac
721 ctggttccta agcctgtacc acctccttcc aagcctaatg catggaaagc taacaggatg
781 gagcacaagt caggatccct ttcctctagc cgggagtctg cttttaccag tccaatctct
841 gttaccaaac cagtggtact ggctagtggt gcagctctga gttctcccaa agagagtccc
901 tccagcacca cccctccaat tgagatcagc tcctctcgtc tgaccaagtt gacccgccga
961 accaccgaca ggaagagtga gttcctgaaa actctgaagg atgaccggaa tggagacttc
1021 tcagagaata gagactgtga caagctggaa gatttggagg acaacagcac acctgaacca
1081 aaggaaaatg gggaggaagg ctgtcatcaa aatggtcttg ccctccctgt agtggaagaa
1141 ggggaggttc tctcacactc tctagaagca gagcacaggt tattgaaagc tatgggttgg
1201 caggaatatc ctgaaaatga tgagaattgc cttcccctca cagaggatga gctcaaagag
1261 ttccacatga agacagagca gctgagaaga aatggctttg gaaagaatgg cttcttgcag
1321 agccgcagtt ccagtctgtt ctccccttgg agaagcactt gcaaagcaga gtttgaggac
1381 tcagacaccg aaaccagtag cagtgaaaca tcagatgacg atgcctggaa gtaggcatat
1441 aaatgctcac agttaaatct gacccagtaa actctgtgtg tttagggagt atacaaaaga
1501 aatcgttctt ttccttttct tatgttgttg aatacttcat tcacaaggga aataatcata
1561 tcccaaagag agagcaattg gcttgttttg cttttgttat tgttcttccc tgttatctgc
1621 tttatagaga gaagtttgtg tggtgggaca gattttttaa acacactcac acacacacac
1681 acatacacac ccagtatata tggggcgatg cacaggtagg agctggcagt gcagggaaga
1741 ggagacactg gtctgcagca acagcttcta ctaccagccc ttggggcact cacccctgtg
1801 atcaagcaat cattgtcaat gacaaagtga ctattgaagt tataattgta ttaaattaat
1861 gctaataatt tggatatttt attttatttt tggctgctcg ggtaacttta gcccttaacc
1921 aagcatatgt gggttttttt ggttgttttt ttttgttttt tttttctttt tcctttttgg
1981 gtacagctgt aaaatatttg gatataggaa atgttgtgtt attcttgcag ccttgatatt
2041 cagggtggat tgtaaaatat aaatttttgt gagatttcaa agattaagat tattttgata
2101 acattattta cagatttaaa agatgtggtt atcacaagtc tcgaggggga aactactgca
2161 taaaataact aacttggaat aaatattttg catcagtttg gattgtcttg tgtaagaagt
2221 atattttctt taaaattaga tgagtggatt cttttttagg ggaaatattt ttagaagttg
2281 gggggaaatg tgaattcaga cacaactgtt tctctatttt agcagatact tttttgatgc
2341 agaaaaacct gtgcaataaa ttaccagtaa taaagtcaga aaaaaaaaaa aaaaaaaaa
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