LOCUS BC052243 1636 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens G protein-coupled receptor 180, mRNA (cDNA clone
MGC:59885 IMAGE:6083073), complete cds.
ACCESSION BC052243
VERSION BC052243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1636)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1636)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31657146.
FEATURES Location/Qualifiers
source 1..1636
/db_xref="H-InvDB:HIT000053751"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59885 IMAGE:6083073"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1636
/gene="GPR180"
/gene_synonym="ITR"
/db_xref="GeneID:160897"
/db_xref="HGNC:HGNC:28899"
/db_xref="MIM:607787"
CDS 26..1348
/gene="GPR180"
/gene_synonym="ITR"
/codon_start=1
/product="G protein-coupled receptor 180"
/protein_id="AAH52243.1"
/db_xref="GeneID:160897"
/db_xref="HGNC:HGNC:28899"
/db_xref="MIM:607787"
/translation="MGGLRLLAVALTCCWWPQGSQGKTLRGSFSSTAAQDAQGQRIGH
FEFHGDHALLCVRINNIAVAVGKEAKLYLFQAQEWLKLQQSSHGYSCSEKLSKAQLTM
TMNQTEHNLTVSQIPSPQTWHVFYADKYTCQDDKENSQVEDIPFEMVLLNPDAEGNPF
DHFSAGESGLHEFFFLLVLVYFVIACIYAQSLWQAIKKGGPMHMILKVLTTALLLQAG
SALANYIHFSSYSKDGIGVPFMGSLAEFFDIASQIQMLYLLLSLCMGWTIVRMKKSQS
RPLQWDSTPASTGIAVFIVMTQSVLLLWEQFEDISHHSYHSHHNLAGILLIVLRICLA
LSLGCGLYQIITVERSTLKREFYITFAKGCILWFLCHPVLACISVIFSDYQRDKVITI
GVILCQSVSMVILYRLFLSHSLYWEVSSLSSVTLPLTISSGHKSRPHF"
BASE COUNT 483 a 331 c 352 g 470 t
ORIGIN
1 cgtcggtgca gacctggaga cgggcatggg ggggctgcgg ctgctggctg tggccctcac
61 gtgctgctgg tggccgcagg gcagccaggg taagaccctg cggggcagct tcagcagcac
121 cgcggcccag gacgcccagg gccagcgcat cggccacttc gagttccatg gtgaccatgc
181 tcttctgtgt gtcagaatca acaacatagc agtagctgtt ggaaaagaag ctaaactcta
241 cctgttccaa gcccaggaat ggctaaagct acagcaaagc agtcatggtt atagctgtag
301 tgaaaaatta tccaaagctc agttgacaat gaccatgaac cagaccgaac ataatctgac
361 agtgtcccag attccgtctc cacaaacgtg gcatgtgttt tatgcagaca agtatacatg
421 ccaagatgac aaggagaatt ctcaggtgga agatatccca tttgaaatgg tgttactaaa
481 cccagatgcc gaagggaatc catttgatca ttttagtgct ggagaatctg ggttacatga
541 gttctttttc ctcctagtcc tagtgtactt tgtgattgct tgcatttatg ctcaatcatt
601 gtggcaggct attaagaaag gcggacccat gcacatgatt ttaaaggttc tgacaactgc
661 attgctgtta caagctggtt cagctttagc taattacatt catttctcca gttactccaa
721 agatggaata ggggtaccat ttatgggaag tttggcagaa ttttttgaca tcgcttccca
781 aattcagatg ttatacttac ttttgagtct atgcatgggt tggacaatag tcagaatgaa
841 gaagtctcaa agcagacctc tccagtggga ttctacacct gcatccactg gcattgcagt
901 attcattgtc atgacacaga gtgttttgct actttgggaa cagtttgaag atatcagtca
961 tcatagctac cattcacacc acaacttagc agggatcctc ctaattgttc taagaatttg
1021 cctagcattg tcattaggct gtggactcta tcagatcatc acagtggaga gaagtacact
1081 caaaagggag ttctacatca catttgccaa aggctgtatc ttgtggtttt tatgccatcc
1141 agttcttgca tgcatttctg tcatttttag cgactaccaa agagacaagg ttattacaat
1201 aggtgttatc ctttgccagt ctgtttccat ggttattctc tacagactct ttctgtctca
1261 cagtctatac tgggaagttt cttcactttc ttcagtaaca ctaccactga ccatatcatc
1321 tggacacaaa agtcgccctc atttctgata cttgattttt gttgagagga aaagtgaatt
1381 ggttaaaaga gtgcaataag gatccaaata cagtgacttt tttttcatac atttagtatg
1441 aaaacttgaa cagcgaaagc agagcatgtt atttatataa ctgcatttaa gcagtaccaa
1501 gactgaaaaa aaaggtaata aatgaaatgt tttgaaatat acttaaacaa caaactttga
1561 agaaagtgtt gttataaaat tattgaagcg atttctatgt ggaaataaat gtgaaaaata
1621 aaaaaaaaaa aaaaaa
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