LOCUS BC052236 2896 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 21, mRNA (cDNA clone
MGC:59967 IMAGE:5431360), complete cds.
ACCESSION BC052236
VERSION BC052236.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: d Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222226.
FEATURES Location/Qualifiers
source 1..2896
/db_xref="H-InvDB:HIT000053750"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59967 IMAGE:5431360"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2896
/gene="C19orf21"
/db_xref="GeneID:126353"
/db_xref="HGNC:HGNC:27000"
CDS 104..2143
/gene="C19orf21"
/codon_start=1
/product="chromosome 19 open reading frame 21"
/protein_id="AAH52236.1"
/db_xref="GeneID:126353"
/db_xref="HGNC:HGNC:27000"
/translation="MDRVTRYPILGIPQAHRGTGLVLDGDTSYTYHLVCMGPEASGWG
QDEPQTWPTDHRAQQGVQRQGVSYSVHAYTGQPSPRGLHSENREDEGWQVYRLGARDA
HQGRPTWALRPEDGEDKEMKTYRLDAGDADPRRLCDLERERWAVIQGQAVRKSSTVAT
LQGTPDHGDPRTPGPPRSTPLEENVVDREQIDFLAARQQFLSLEQANKGAPHSSPARG
TPAGTTPGASQAPKAFNKPHLANGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDP
GSLASVESPGTPKETPIEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLTKL
SLITAPRRERGRPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRA
LSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSL
STAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRP
LRFRAPDEPQQAQVPHVWGWEVAGAPALRLQKSQSSDLLERERESVLRREQEVAEERR
NALFPEVFSPTPDENSDQNSRSSSQASGITGSYSVSESPFFSPIHLHSNVAWTVEDPV
DSAPPGQRKKEQWYAGINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD"
BASE COUNT 642 a 910 c 897 g 447 t
ORIGIN
1 aggagtcaga gtggaggctg cagactgtgg agccgggagc cggcagtaag cccagaggtc
61 tccaccccac gggaggaagg ctgaggccaa gaccccggaa gagatggacc gcgtgaccag
121 ataccccatc ctgggcatcc ctcaggcaca ccgtggcacc ggcctggtgc tggatggaga
181 caccagctac acataccatc tggtgtgcat gggccccgag gccagcggct ggggccagga
241 tgagccgcag acatggccca ctgaccacag ggcccagcag ggcgtgcaga ggcagggggt
301 gtcctacagc gtgcatgcct acactggcca gccgtcccca cgggggctcc actcggagaa
361 cagggaggat gagggttggc aggtttaccg cctgggcgcc agggatgccc accagggacg
421 tccaacatgg gcactccgcc cagaggacgg ggaggacaag gagatgaaga cctaccgcct
481 ggatgctggg gacgctgacc ccaggaggct gtgtgacctg gagcgggagc gctgggccgt
541 catccagggc caggcagtca ggaagagcag caccgtggcc acgctccagg gcactcctga
601 ccacggagac cccaggaccc ccggcccacc tcggtccacg cccctggagg agaacgtggt
661 tgacagggag cagattgact tcctggcagc gagacagcag ttcctgagtc tggagcaggc
721 gaacaagggg gcccctcata gctccccggc cagggggacc cctgcaggca caaccccagg
781 ggccagccag gcccccaagg ccttcaacaa gccccacctg gccaacgggc acgtggttcc
841 catcaagccc caggtgaagg gggtggtcag ggaagagaac aaggtgcgtg ctgtgcccac
901 ctgggccagt gtccaagttg tggatgaccc tggctccttg gcctcagtgg agtccccggg
961 gacccccaag gagacgccca tcgagcggga gatccgtctg gctcaggagc gtgaggcaga
1021 cctgcgagag cagagggggc ttcggcaggc aaccgaccac caggagctgg tggaaatccc
1081 caccaggccg ctgctgacca agctgagcct gatcacagcc ccacggcggg agagagggcg
1141 cccgtccctc tacgtgcagc gggacatagt acaggagaca cagcgtgagg aagaccaccg
1201 gcgggagggc ctgcacgtgg gccgggcgtc cacacccgac tgggtctcgg agggtcccca
1261 gcccggactc cggagagccc tcagctcaga ttccatcctc agcccggccc cagatgcccg
1321 tgcggccgac ccagctccag aagtgaggaa ggtgaaccgc atcccacctg atgcctacca
1381 gccgtacctg agccccggga ccccccagct agaattctca gccttcggag cattcggcaa
1441 gcccagcagt ctctccacag cggaggccaa ggctgcgact tcaccaaagg ccacgatgtc
1501 cccgaggcat ctctcagaat cctctggaaa acccctgagc acaaagcaag aggcatcgaa
1561 gccccctcgg ggatgcccgc aagccaacag gggtgtcgtg cggtgggagt acttccgcct
1621 gcgtcctctg cggttcaggg ccccagacga gccccagcag gcccaagtcc cccatgtctg
1681 gggctgggag gtggctgggg cccctgcact gaggctgcag aagtcccagt catctgatct
1741 gctggaaagg gagagggaga gtgtcctgcg ccgggagcaa gaggtggcag aggagcggag
1801 aaatgctctc ttcccagagg tcttctcccc aacgccagat gagaactctg accagaactc
1861 caggagctcc tcccaggcat ccggcatcac gggcagttac tcggtgtctg agtctccctt
1921 cttcagcccc atccacctac actcaaacgt ggcgtggaca gtggaagatc cagtggacag
1981 tgctcctccc gggcagagaa agaaggagca atggtacgct ggcatcaacc cctcggacgg
2041 tatcaactca gaggtcctgg aagccatacg ggtgacccgt cacaagaacg ccatggcaga
2101 gcgctgggaa tcccgcatct acgccagtga ggaggatgac tgagcctcgg gatggggcgc
2161 ccaccccctg ccctgccctg accctcgtgg gaactgccaa gaccatcgcc aagcccccac
2221 cctaggaaat gggtcctagg tccaggatcc aagaaccaca gctcatctgc caacaatccc
2281 accatgggca catttgggac tgttgggttt ttcgtttccg tttctatctt cctttagaaa
2341 tgtttctgcc tttggggtct aaagcttttg gggatgaaat gggacccctg ctgattcttt
2401 ctgcttctaa gactttgcca aatgccctgg gtctaagaaa gaaagagacc cgctcctcca
2461 ctttcaggtg taatttgctt ccgctagtct gagggcagag ggaccggtca aagagggtgg
2521 cacagatcgc agcaccttga ggggctgcgg gtctgaggga ggagacactc agctcctccc
2581 tctgagaagt cccaagctga gaggggagac ctgccccttt ccaaccctgg gaaaccatcc
2641 agtctgaggg aggaggccaa actcccagtg ctgggggtcc ctgtgcagcc ctcaaaccct
2701 tcaccttggt gcacccagcc acacctggtg gacacaaagc tctcacatcg ataggatccc
2761 atgaggatgg tccccttcac ctgggagaaa agtgacccag tttaggagct ggaggggggt
2821 ctttgtcccc cacccccaaa ctgccctgaa ataaacctgg agtgagctgc caaaaaaaaa
2881 aaaaaaaaaa aaaaaa
//