LOCUS BC051883 4110 bp mRNA linear HUM 12-APR-2007
DEFINITION Homo sapiens castor zinc finger 1, mRNA (cDNA clone MGC:60281
IMAGE:5534858), complete cds.
ACCESSION BC051883
VERSION BC051883.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4110)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4110)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC051883.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254903.
FEATURES Location/Qualifiers
source 1..4110
/db_xref="H-InvDB:HIT000053731"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60281 IMAGE:5534858"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4110
/gene="CASZ1"
/gene_synonym="cst"
/gene_synonym="dJ734G22.1"
/gene_synonym="RP4-734G22.2"
/gene_synonym="SRG"
/gene_synonym="ZNF693"
/db_xref="GeneID:54897"
/db_xref="HGNC:HGNC:26002"
/db_xref="MIM:609895"
CDS 17..3517
/gene="CASZ1"
/gene_synonym="cst"
/gene_synonym="dJ734G22.1"
/gene_synonym="RP4-734G22.2"
/gene_synonym="SRG"
/gene_synonym="ZNF693"
/codon_start=1
/product="castor zinc finger 1"
/protein_id="AAH51883.2"
/db_xref="GeneID:54897"
/db_xref="HGNC:HGNC:26002"
/db_xref="MIM:609895"
/translation="MDLGTAEGTRCTDPPAGKPAMAPKRKGGLKLNAICAKLSRQVVV
EKRADAGSHTEGSPSQPRDQERSGPESGAARAPRSEEDKRRAVIEKWVNGEYSEEPAP
TPVLGRIAREGLELPPEGVYMVQPQGCSDEEDHAEEPSKDGGALEEKDSDGAASKEDS
GPSTRQASGEASSLRDYAASTMTEFLGMFGYDDQNTRDELARKISFEKLHAGSTPEAA
TSSMLPTSEDTLSKRARFSKYEEYIRKLKAGEQLSWPAPSTKTEERVGKEVVGTLPGL
RLPSSTAHLETKATILPLPSHSSVQMQNLVARASKYDFFIQKLKTGENLRPQNGSTYK
KPSKYDLENVKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDVRGIQKPGPAKVPPT
PSLAPAPLASVPSAPSAPGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVSTVKNGL
PTDKPAVTEDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQRFTSKQDV
IRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTS
DVMTHENFHKKNTQLINDGFQRFRATEDCGTADCQFYGQKTTHFHCRRPGCTFTFKNK
CDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRAGCGFTFTST
SQMTSHKRKHERRHIRSSGALGLPPSLLGAKDTEHEESSNDDLVDFSALSSKNSSLSA
SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQGLPGSIPLALALSNSGLPTP
TPYFPILAGRGSTSPPVGTPSLLGAVSSGSAASATPDTPTLVASGAGDSAPVAAASVP
APPASIMERISASKGLISPMMARLAAAALKPSATFDPGSGQQVTPARFPPAQVKPEPG
ESTGAPGPHEASQDRSLDLTVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGSLL
NIKAEAEGSPAAEPSPFLGKAVKALVQEKLAEPWKVYLRRFGTKDFCDGQCDFLHKAH
FHCVVEECGALFSTLDGAIKHANFHFRTEGGAAKGNTEAAFPASAAETKPPMAPSSPP
VPPVTTATVSSLEGPAPSPASVPSTPTLLAWKQLASTIPQMPQIPASVPHLPASPLAT
TSLENAKPQVKPGFLQFQEK"
BASE COUNT 855 a 1423 c 1183 g 649 t
ORIGIN
1 gaccaaggag aagagaatgg atcttggaac agctgagggc acccggtgca cggacccgcc
61 tgcaggcaag cccgccatgg cgcccaaacg caagggtggc ctgaagctga acgccatctg
121 cgccaagctg agccgccagg tggtggtgga gaagcgagct gacgccggct cccacacgga
181 gggcagccca tcgcagcccc gggaccaaga gcgcagtggc cctgagtctg gggcagcccg
241 ggccccccgc agcgaggaag acaagagacg ggcagtgatc gagaagtggg tgaacgggga
301 gtacagcgag gagccggcac ccacacccgt gttggggcgg attgcccgcg agggcctgga
361 gctgcctccc gagggtgtct acatggtgca gccccagggg tgcagcgatg aggaagacca
421 cgcggaggag ccctccaagg acggcggtgc cctggaggag aaggattcgg acggggcagc
481 ctccaaggag gacagcggcc ccagcaccag gcaggcttca ggagaggcct cctcgctgcg
541 ggactacgcg gcctccacca tgaccgagtt cctcggcatg tttggctatg atgaccagaa
601 cacgcgggac gagctggcca ggaagatcag ctttgagaag ctgcacgcgg gctccacccc
661 ggaggcagcc acctcctcca tgctgcccac ctccgaggat accctcagca agcgggcgcg
721 gttctctaag tatgaggagt acatccgcaa gctcaaggct ggcgagcagc tctcctggcc
781 ggcccccagc accaagaccg aggagcgggt gggcaaggag gtggtgggca ccctgcccgg
841 cctgcggctg cccagcagca cggcccacct ggagaccaag gccaccatcc tgcccctgcc
901 gtcgcacagc agtgtccaga tgcagaacct ggtagcccgg gcctccaagt acgacttctt
961 catccaaaaa ctgaagaccg gcgagaatct gcggccccag aacgggagca cctacaagaa
1021 gccatccaag tacgacctgg agaatgtcaa gtacctgcac ctcttcaaac ccggggaggg
1081 cagccccgac atgggcgggg ccatcgcctt caagacaggc aaggtggggc gcccttccaa
1141 gtacgacgtc cggggcatcc agaagccagg ccccgccaag gttccgccca cccccagcct
1201 ggctcccgca cccctcgcca gcgtgcccag tgcccccagc gcccccgggc cagggccaga
1261 gcctcctgcc tccctgtcct tcaacactcc cgagtacctg aagtcaacct tctccaaaac
1321 agactccatc accacgggga ccgtctccac tgtcaagaac ggactgccca cagataaacc
1381 agccgtcact gaagatgtaa acatttacca gaaatatatt gccaggttct cgggcagcca
1441 gcactgtggc cacatccact gtgcctacca gtaccgcgag cactaccact gccttgaccc
1501 tgagtgtaac taccagaggt tcacgagtaa gcaggacgtg atccgccact acaacatgca
1561 caagaagcgc gacaactccc tgcagcacgg cttcatgcgt ttcagcccgc tggacgactg
1621 cagcgtctac taccacggct gccacctcaa tgggaagagc acccactatc actgcatgca
1681 ggtgggctgt aacaaggtgt acacgagcac gtctgacgtg atgacccacg agaacttcca
1741 caagaagaat acccagctca ttaacgacgg cttccagcgc ttccgagcca ccgaagactg
1801 tggcacagcc gactgccagt tctacggaca gaagaccacg cacttccact gcaggcgccc
1861 cggctgcaca ttcactttca agaacaagtg tgacatcgag aagcacaaga gctaccacat
1921 caaggacgat gcctacgcca aggacggctt caagaagttc tacaagtacg aggagtgcaa
1981 gtacgagggc tgcgtgtaca gcaaggctac caaccacttc cactgcatcc gcgccggctg
2041 cggcttcacc ttcacctcca ccagccagat gacctctcac aagcgcaagc atgagcgccg
2101 gcacatccgc tcctcgggcg cgctggggct gccgccctcg ctgctgggcg ccaaggacac
2161 ggagcacgag gagtccagca acgacgacct tgttgacttc tccgccctga gcagcaagaa
2221 ctccagcctg agcgcctccc ctaccagcca gcagtcctct gcgtccctgg ctgccgccac
2281 tgccgccacc gaggctgggc ccagtgccac caaacctccc aacagcaaga tctcggggct
2341 gctgccccag ggcctgcctg gctcgatccc cctggccctg gccctctcca actcgggcct
2401 gcccaccccc acgccctact tccccatact ggctggccgt gggagcacct ccccgcctgt
2461 gggcaccccc agcctcctgg gtgccgtgtc gtctgggtca gcagcctcag ccacccctga
2521 cacacccacg ctggtcgcct cgggagctgg agactcagcc cccgtggctg ccgcctctgt
2581 cccggcacca cccgcctcca tcatggagag gatctctgca agcaagggcc tcatctcgcc
2641 catgatggcc aggctggctg cagctgccct taagccctct gccacctttg acccaggaag
2701 cgggcagcag gtcaccccag ccaggttccc cccggcccaa gtgaagccgg aacccggtga
2761 gagcaccggc gccccaggcc cccacgaagc ctcccaggac cgcagtctag acctgactgt
2821 gaaggagccc agcaacgaat caaatggcca cgcagtcccg gcaaattcat ctcttttatc
2881 ctcgcttatg aataagatgt ctcagggcaa ccctggcctg ggcagcctgc tgaacatcaa
2941 ggcggaagcg gaggggagcc ccgctgcgga gccctcgccc ttcctaggca aggccgtgaa
3001 ggcgctggtt caggagaagt tggcagagcc ctggaaggtg tacctgcgca ggtttggtac
3061 aaaggacttc tgtgacggcc agtgtgactt cctccacaag gcccacttcc actgcgtggt
3121 ggaggaatgc ggcgcgctct tcagcacctt ggacggggcc atcaagcacg caaacttcca
3181 cttccggaca gagggaggag cagcaaaagg aaacacagag gctgcctttc cggcctcggc
3241 cgccgagacc aaacctccca tggccccctc gtcccctccg gtccctcctg tcaccacggc
3301 cacggtgtcc tctctggagg ggcccgctcc cagcccggcc tccgtgccct ccacccccac
3361 cctgctcgcc tggaagcagc tggcttccac cataccccag atgcctcaga tcccagcgtc
3421 agtgcctcac ctgcccgcct cgcccttggc aacgacttct ctagagaacg ccaagcccca
3481 ggtcaaaccc ggattcctcc agttccagga gaagtgagtc cctcgatgag ccgggagtcc
3541 cgcgttcccc tcgcgtctcg ggagtaggtg ctagcaaggg cgctaggagg ccctgttcct
3601 cactgcggat ggtgctgctg tccccagcct ctctggggca tggccatcgg gtgatgtcct
3661 tctagccaaa gatgctgctg ctcctacctc actgcctgtc ccagagcagg ccagcccgcg
3721 tgggccgatg gtggcggcag tggctactgc tcctgcaggg catgtggtga tcctgccagg
3781 gccaggtggg gtggactggg cgtggtggtc ctcagaggac aactcccagc ctgacaagga
3841 gggctgcgtc tccctccgag cctccgtatt ggcctcctct gtggctcaca cccatggctg
3901 aatctctaca gggcacgtga agtcacgggt aggggccagg cccctccagg ccgtcactgg
3961 cctgcacagt ggtctgagct cttgggtgga agggaccctc ctcactggat ggtggtggct
4021 ccttgcaggg agaacggtga ctttgtattg tcatgtgtgc ggcttcctgt tctcaataaa
4081 agtaataaat tggaaaaaaa aaaaaaaaaa
//