LOCUS BC051850 1366 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens transmembrane protein 120A, mRNA (cDNA clone MGC:60180
IMAGE:6201334), complete cds.
ACCESSION BC051850
VERSION BC051850.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994299.
FEATURES Location/Qualifiers
source 1..1366
/db_xref="H-InvDB:HIT000053711"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60180 IMAGE:6201334"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1366
/gene="TMEM120A"
/gene_synonym="TMPIT"
/db_xref="GeneID:83862"
/db_xref="HGNC:HGNC:21697"
CDS 90..1121
/gene="TMEM120A"
/gene_synonym="TMPIT"
/codon_start=1
/product="transmembrane protein 120A"
/protein_id="AAH51850.1"
/db_xref="GeneID:83862"
/db_xref="HGNC:HGNC:21697"
/translation="MQPPPPGPLGDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQ
NNCTSSITRQKKRLQELALALKKCKPSLPAEAEGAAQELENQMKERQGLFFDMEAYLP
KKNGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVT
DAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSAFLSGVMLTWPDGLMYQK
FRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLL
PFLFFGHFWQLFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFH
SQRHGSKKD"
BASE COUNT 302 a 400 c 379 g 285 t
ORIGIN
1 cggaagcgga cgggggcggt ggcggaggag cctcgggtgg gccggggttg ctgcgccgtc
61 ctccactact ggctactggc gctgcagcca tgcagccccc gcccccgggc ccgctgggcg
121 actgcctgcg ggactgggag gatctacagc aggacttcca gaacatccag gagacccatc
181 ggctctaccg cctgaagctg gaggagctga ccaaacttca gaacaattgc accagctcca
241 tcacgcggca gaagaagcgg ctccaggagc tggccctcgc cctgaagaaa tgcaaaccct
301 ccctcccagc agaggccgag ggggccgcac aggagctgga gaaccagatg aaagagcgcc
361 aaggcctctt ctttgacatg gaggcctatt tgcctaagaa gaatggattg tacctgagcc
421 tggttctggg gaacgtcaac gtcacgctcc tgagcaagca ggctaagttt gcctacaagg
481 acgagtatga gaagttcaag ctctacctca ccatcatcct catcctcatc tccttcactt
541 gccgcttcct gctcaactcc agggtgacag atgctgcctt caacttcctg ctggtctggt
601 actactgcac cctgaccatc cgggagagca tcctcatcaa caacggctcc cggatcaaag
661 gctggtgggt gttccatcac tacgtgtccg ccttcctgtc gggagtcatg ctgacgtggc
721 ccgacggtct catgtaccag aaattccgga accaattcct ctccttttcc atgtaccaga
781 gcttcgtgca gtttctccag tactactacc agagcggctg cctctaccgc ctgcgggcgc
841 tgggcgagcg gcacaccatg gacctcactg tggagggctt ccagtcctgg atgtggcggg
901 gcctcacctt cctgctgcct tttcttttct ttggacactt ctggcagctt tttaacgcgc
961 tgacgttgtt caacctggcc caggaccctc agtgcaagga gtggcaggtg cttatgtgcg
1021 gctttccctt cctcctcctt ttcctcggca atttcttcac caccctgagg gttgtgcacc
1081 acaagtttca cagtcagcgg cacgggagca agaaggattg aggctgggcc ttcccctgcc
1141 ggcccagagg ggcttctgtc ctgtgtgttg tgggagggga tgggaggcgc ccctcgagtg
1201 tgcgtgtatc agggggtctc ttctattctc ccttgggttt tatgggcgct gtgggccctg
1261 aaggaagacc tgggcccagt gccctcaata aagagaggcc cagaggtgga aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//